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TranscriptomicsTwist1 is a key regulator for cancer-associated fibroblasts
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2014-10-28 | E-GEOD-62740 | biostudies-arrayexpress
Genomicsena-DATASET-asan-ccgd-27-09-2019-00:22:21:191-59 - samples
231 HCC exome sequencing with Sureselect 50Mb
EGAD00001005361 | EGA
GenomicsThese are from Korean HCC samples with exome sequencing
Hepatic resection is the most curative treatment option for early-stage hepatocellular carcinoma, but is associated with a high recurrence rate, which exceeds 50% at 5 years after surgery. Understanding the genetic basis of hepatocellular carcinoma at surgically curable stages may enable the identif...
EGAS00001000604 | EGA
Genomicswhole exome sequencing of Korean hepatocellular carcinomas
Data Access Committee EGAC00001000329
EGAC00001000329 | EGA
TranscriptomicsTwist1 knockdown in two gastric cancer-associated fibroblast lines
Primary human gastric cancer-associated fibroblast (CAF) cultures (CAF14 and CAF32) were establised from 2 gastrectomy specimens. Silencing the expression (loss-of-function effect) of Twist1 in CAFs showed candidate target genes regulated by Twist1 and abrogated their tumor-promoting properties. Exp...
ORGANISM(S): Homo sapiens 
2014-10-28 | E-GEOD-62738 | biostudies-arrayexpress
TranscriptomicsTwist1 gain-of-function studied in 2 normal gastric fibroblast lines
Primary human gastric normal fibroblast cultures (NL14 and NL32, repectivley) were establised from 2 gastrectomy specimens. Enforced expression (gain-of-function effect) of Twist1 in 2 gastric normal fibroblasts (NL14 and NL32) showed candidate target genes and CAF markers upregulated by Twist1. Exp...
ORGANISM(S): Homo sapiens 
2014-10-28 | E-GEOD-62739 | biostudies-arrayexpress
TranscriptomicsGenome-wide gene expression comparison (primary central nervous system lymphoma (PCNSL) vs normal lymph node)
A genome-wide gene expression comparison between primary central nervous system lymphoma (PCNSL) and normal lymph node was performed to identify a differential exprssion and specific pathway. Experiment design: 7 PCNSL and 7 normal lymph node tissues were used for comparison.
ORGANISM(S): Homo sapiens 
2010-11-13 | E-GEOD-25297 | biostudies-arrayexpress
TranscriptomicsGenomic profiling combined with gene expression profiling in primary central nervous system lymphoma
This SuperSeries is composed of the following subset Series: GSE25297: Genome-wide gene expression comparison (primary central nervous system lymphoma (PCNSL) vs normal lymph node) GSE25298: Genomic aberrations in primary central nervous system lymphoma (PCNSL) Refer to individual Series
ORGANISM(S): Homo sapiens 
2010-11-13 | E-GEOD-25299 | biostudies-arrayexpress
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