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UnknownxHMMER3x2: Utilizing HMMER3's speed and HMMER2's sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation.
Not available
S-EPMC5126834 | biostudies-literature
UnknownCo-lethality studied as an asset against viral drug escape: the HIV protease case.
Not available
S-EPMC2898770 | biostudies-literature
UnknownDetection of co-eluted peptides using database search methods.
Not available
S-EPMC2483259 | biostudies-literature
ProteomicsThe Parkinson's disease protein alpha-synuclein is a direct modulator of Processing-bodies and mRNA stability
Hallacli E, Kayatekin C, Nazeen S, Wang XH, Sheinkopf Z, Sathyakumar S, Sarkar S, Jiang X, Dong X, Di Maio R, Wang W, Keeney MT, Felsky D, Sandoe J, Vahdatshoar A, Udeshi ND, Mani DR,Carr SA, de Jager P, Myers CL, Lindquist S, Greenmyre TJ, Bartel DP, Feany MB, Sunyaev S, Chung CY and Khurana V. Alp...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-03-09 | MSV000089026 | MassIVE
TranscriptomicsRNA-seq of HEK293T cell line
Two regulatory elements in chr8 (chr8:579137-581436) and chr20 (chr20:62115827-62119284) were deleted using CRISPR and the effects of their deletion were assessed using RNA-seq
ORGANISM(S): Homo sapiens 
2017-08-01 | E-MTAB-5714 | biostudies-arrayexpress
TranscriptomicsATAC-seq of HEK293T cell line
An enhancer of chr8 (chr8:579137-581436) was deleted using CRISPR and the effects of its deletion were assessed using ATAC-seq
ORGANISM(S): Homo sapiens 
2017-08-01 | E-MTAB-5702 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing of naked mole rat, Heterocephalus glaber
Deep sequencing of mRNA from naked mole rat Analysis of ploy(A)+ RNA of different specimens: brain, kidney, liver from new born , 4 years old , 20 years old and 4 years old hypoxia-exposed naked mole rat
ORGANISM(S): Heterocephalus glaber 
2011-10-12 | E-GEOD-30337 | biostudies-arrayexpress
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