Suzuki S S - OmicsDI

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Unknown (8413)
Transcriptomics (254)
Proteomics (100)
Genomics (20)
Metabolomics (20)
Clinical (1)

Organisms

Homo sapiens (91)
Mus musculus (77)
Arabidopsis thaliana (25)
Saccharomyces cerevisiae (11)
Escherichia coli (8)
Pseudomonas putida (5)
Rattus norvegicus (5)
Xenopus laevis (4)
Coturnix japonica (3)
Nicotiana tabacum (3)
Salmonella enterica subsp. enterica serovar Typhimurium (3)
Paralichthys olivaceus (2)
Oryza sativa (2)
Drosophila melanogaster (2)
Danio rerio (2)
Swertia japonica (1)
Hymenochirus boettgeri (1)
Lonicera japonica (1)
Lateolabrax japonicus (1)
Drosophila mojavensis (1)
Streptomyces griseus subsp. griseus NBRC 13350 (1)
marine metagenome (1)
Bombyx mori (1)
Pan troglodytes (1)
Schizosaccharomyces pombe (1)
Aspergillus fumigatus Af293 (1)
Solanum lycopersicum (1)
Glycine max (1)
Oryza sativa Japonica Group (1)
Triticum aestivum (1)

Organisms

Sorghum bicolor (1)
Rattus norvegicus (1)
Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (267)
pride (58)
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Tissue

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Liver (2)
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Disease

Disease free (2)
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Normal (1)
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Technology Type

Mass Spectrometry (58)
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Affinity purification coupled with mass spectrometry proteomics (13)
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Instrument Platform

Illumina HiSeq 2500 (6)
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Thermo Scientific LTQ FT Ultra (1)
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Xevo G2 QTOF (Waters) (1)
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Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
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Publication Date

2010 (56)
2013 (33)
2011 (32)
2012 (28)
2016 (25)
2015 (25)
2014 (25)
2025 (20)
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2021 (17)
2023 (17)
2008 (16)
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2009 (12)
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2019 (8)
2018 (6)
2007 (6)
2024 (5)
2006 (3)
2004 (2)
2005 (1)

CHEBI ID

CHEBI:17822 (9)
CHEBI:28044 (9)
CHEBI:16811 (9)
CHEBI:22653 (8)
CHEBI:30769 (8)
CHEBI:15741 (8)
CHEBI:18186 (8)
CHEBI:18237 (7)
CHEBI:18012 (7)
CHEBI:25094 (7)
CHEBI:26271 (7)
CHEBI:24898 (7)
CHEBI:16335 (7)
CHEBI:22660 (6)
CHEBI:17521 (6)
CHEBI:28790 (6)
CHEBI:17992 (6)
CHEBI:15428 (6)
CHEBI:28300 (6)
CHEBI:27266 (6)
CHEBI:25017 (6)
CHEBI:27570 (5)
CHEBI:24266 (5)
CHEBI:30915 (5)
CHEBI:33508 (5)
CHEBI:15756 (5)
CHEBI:17268 (5)
CHEBI:15978 (5)
CHEBI:16765 (5)
CHEBI:6650 (5)

Metabolite Name

Proline (5)
Adenosine (5)
Methionine (4)
Pantothenic acid (4)
Asparagine (4)
Inosine (4)
Sucrose (4)
Carnitine (3)
Allantoin (3)
Succinic acid (3)
Glycine (3)
Valine (3)
Leucine (3)
Palmitic acid (3)
Serine (3)
Isoleucine (3)
Guanosine (3)
Uridine (3)
CORTICOSTERONE (2)
Oxaloacetate (2)
Taurochenodeoxycholic Acid (2)
2'-Deoxyadenosine (2)
S-adenosyl-L-homocysteine (2)
Cyclic AMP (2)
L-citrulline (2)
L-aspartic acid (2)
Cysteine (2)
Glutamylleucine (2)
Stearidonate (18:4n3) (2)
L-Malic acid (2)

First Public Date

2017 (2)
2020 (1)
2014 (1)
2013 (1)

Study status

Recruiting (1)

Study type

Transcription profiling by array (157)
Unknown experiment type (37)
RNA-seq of coding RNA (25)
ChIP-seq (9)
Methylation profiling by array (7)
Transcription profiling by tiling array (4)
RNA-seq of non coding RNA (4)
Comparative genomic hybridization by array (3)
Other (3)
Methylation profiling by high throughput sequencing (3)
Transcription profiling by SAGE (2)
Animal - High-throughput sequencing (2)
Genotyping by array (2)
ChIP-chip by tiling array (1)
Human - Single-cell sequencing (1)
Plant - One-color microarray (1)
Cell line - High-throughput sequencing (1)
RIP-seq (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)
Interventional (1)

Release Date

2022 (1002)
2025 (897)
2023 (881)
2021 (880)
2024 (711)
2020 (699)
2019 (497)
2018 (447)
2017 (405)
2016 (378)
2014 (309)
2015 (306)
2013 (220)
2012 (174)
2010 (154)
2011 (152)
2026 (148)
2009 (90)
2008 (80)
2007 (60)
2006 (34)
2005 (33)
2004 (30)
2002 (24)
2000 (22)
2003 (17)
2001 (10)
1999 (9)
1998 (9)
1997 (1)

Lab affiliation

Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (9)
Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan. (4)
Biotechnology Research Center, The University of Tokyo, Tokyo, Japan. (2)
Lung and Vascular Inflammation Section, Laboratory of Allergic Diseases, NIAID/NIH Bethesda, MD 20892, USA (2)
Cancer Research UK Scotland Institute (Formerly the Cancer Research UK Beatson Institute) Garscube Estate Switchback Road Bearsden Glasgow, G61 1BD (2)
Molecular Parasitology and Entomology Unit,Laboratory of Malaria and Vector Research, National Institutes of Health. USA. (2)
Department of Nephrology, Tokyo Medical and Dental University (TMDU), Tokyo 113-8510, Japan (2)
Institute of Integrative Biology, University of Liverpool, Liverpool, UK (1)
Max Planck Institute for Molecular Bioemedicine, Bioanalytical Mass Spectroemtry (1)
Department of Pharmacy, The University of Tokyo Hospital (1)
Department of Immunotechnology, Lund University, Medicon Village, Lund, Sweden (1)
Biotechnology Research Center, The University of Tokyo (1)
Proteome Research (AG Stühler) Heinrich Heine University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany (1)
Department Biochemistry (1)
Biotechnology Research Center, The University of Tokyo. (1)
Neurosurgeon & Senior Scientist Developmental and Stem Cell Biology, The Hospital for Sick Children, Canada (1)
Département de Biologie, Université de Moncton, Moncton (NB, Canada) (1)
2Division of Pharmaceutical Sciences, School of Pharmacy, University of Wisconsin-Madison, Madison, Madison, WI 53705, USA (1)
Biotechnology Research Center, the University of Tokyo (1)
Juntendo University (1)
Krefting Research Centre, Institute of Medicine at the Sahlgrenska Academy, University of Gothenburg, Sweden (1)
Molecular Evolution and Genomics, Centre for Organismal Studies, Heidelberg University, D69120 Heidelberg, Germany (1)
Ulrike Resch, DI. Dr. rer. nat. Medical University of Vienna Center of Physiology and Pharmacology Department of Vascular Biology and Thrombosis Research Schwarzspanierstraße 17/I A- 1090 Vienna, Austria ORCID-ID:0000-0002-8380-9555 (1)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (1)
Bioscience Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Kingdom of Saudi Arabia (1)
Department of Neurology, Tokushima University Graduate School of Biomedical Sciences, Tokushima, Japan (1)
Dept. Cell Biology and Molecular Medicince, Rutgers-New Jersey Mediccal School, Newark NJ (1)
Faculty of Medicine Department of Chemistry Belgrade Serbia (1)
Max Planck Institute for Molecular Biomedicine Mass Spectrometry Unit Röntgenstr. 20 48149 Münster Germany (1)
Medical Research Council Laboratory of Molecular Biology Francis Crick Avenue Cambridge Biomedical Campus Cambridge CB2 0QH (1)

Location

Russia (1)

Keyword

Full-thickness laparo-endoscopic (1)
Laparoscopic resection (1)
Colorectal tumors (1)

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De novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites

Here, we performed deep transcriptome sequencing for the aerial-tissues and the roots of S. japonica, generating over 2 billion raw reads with an average length of 101 nt by using an Illumina paired-end sequencing by HiSeq2000 platform. Using a combined approach of three popular assemblers, de novo ...

ORGANISM(S): Swertia japonica

2016-07-01 | E-GEOD-80057 | biostudies-arrayexpress

Synthesis of Novel (S)-3-(1-Aminoethyl)-8-pyrimidinyl-2-phenylisoquinolin-1(2H)-ones by Suzuki-Miyaura Coupling and Their Cell Toxicity Activities.

Not available

S-EPMC8779526 | biostudies-literature

Catalytic enantioselective intramolecular Tishchenko reaction of meso-dialdehyde: synthesis of (S)-cedarmycins.

Not available

S-EPMC8695919 | biostudies-literature

Environmental stress enhances biosynthesis of flavor precursors, S-3-(hexan-1-ol)-glutathione and S-3-(hexan-1-ol)-L-cysteine, in grapevine through glutathione S-transferase activation.

Not available

S-EPMC3022412 | biostudies-literature

Immunogenicity and protective efficacy of SARS-CoV-2 recombinant S-protein vaccine S-268019-b in cynomolgus monkeys.

Not available

S-EPMC9167832 | biostudies-literature

The time-series gene expression data in PMA stimulated THP-1

(1) qPCR Gene Expression Data The THP-1 cell line was sub-cloned and one clone (#5) was selected for its ability to differentiate relatively homogeneously in response to phorbol 12-myristate-13-acetate (PMA) (Sigma). THP-1.5 was used for all subsequent experiments. THP-1.5 cells were cultured in ...

ORGANISM(S): Homo sapiens

2010-06-19 | E-GEOD-15528 | biostudies-arrayexpress

Nitrogen-doped polycyclic aromatic hydrocarbons by a one-pot Suzuki coupling/intramolecular S_NAr reaction.

Not available

S-EPMC9811559 | biostudies-literature

S(vi) in three-component sulfonamide synthesis: use of sulfuric chloride as a linchpin in palladium-catalyzed Suzuki-Miyaura coupling.

Not available

S-EPMC8115270 | biostudies-literature

Comparison of the Optical and Electrochemical Properties of Bi(perylene diimide)s Linked through Ortho and Bay Positions.

Not available

S-EPMC6640926 | biostudies-literature

Cyclosporine A Causes Gingival Overgrowth by Promoting Entry into the S Phase at the G1/S Cell Cycle Checkpoint in Gingival Fibroblasts Exposed to Lipopolysaccharide.