Systems ecology

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CHEBI ID

CHEBI:15428 (8)
CHEBI:17822 (7)
CHEBI:28044 (7)
CHEBI:30769 (7)
CHEBI:22660 (6)
CHEBI:18186 (6)
CHEBI:15741 (6)
CHEBI:16449 (6)
CHEBI:18012 (6)
CHEBI:28499 (5)
CHEBI:28300 (5)
CHEBI:24898 (5)
CHEBI:25017 (5)
CHEBI:16335 (5)
CHEBI:17521 (4)
CHEBI:33508 (4)
CHEBI:16243 (4)
CHEBI:68352 (4)
CHEBI:15611 (4)
CHEBI:25094 (4)
CHEBI:18237 (4)
CHEBI:26986 (4)
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CHEBI:17234 (4)
CHEBI:18388 (4)
CHEBI:15760 (4)
CHEBI:16750 (4)
CHEBI:17148 (4)
CHEBI:17754 (4)
CHEBI:16634 (4)

Metabolite Name

Tyrosine (5)
Glycine (5)
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Succinic acid (4)
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L-methionine (3)
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N,N-dimethylglycine (2)
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4-Aminophenylmannoside (2)
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D-allose (2)
Threonic acid (2)

First Public Date

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Modelling Approach

Ordinary differential equation model (2)
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Lab affiliation

Faculty of Medicine, University of Ottawa, Ottawa, ON Canada (3)
University of Cologne, Germany (2)
Department of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel (2)
Head of Molecular Systems Biology Lab (MOSYS), Vice-Head Department Functional & Evolutionary Ecology, Head of Large Instrument Facility for Mass Spectrometry in Life Sciences, Chair of the Vienna Metabolomics Center (VIME) (1)
Biochemistry III – Institute for Biochemistry, Genetics and Microbiology – University of Regensburg – Germany (1)
University of Vienna, Dept. of Functional and Evolutionary Ecology, Molecular Systems Biology, (1)
University of Arizona, Department of Ecology and Evolutionary Biology, Tucson Marine Phage Lab. (1)
Molecular Systems Biology (MoSys), Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria (1)
Devision of Molecular Systems Biology, University of Vienna, Austria (1)
Molecular Systems Biology (MOSYS), Department of Function and Evolutionary Ecology, University of Vienna, Austria (1)
University of Basel, Department of Environmental Science, Spring Ecology Research Group, Klingelbergstrasse 27, 4056, Basel, Switzerland (1)
Prof. Dr. Martin von Bergen Head of Department of Molecular Systems Biology Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 1211 Martin.vonbergen@ufz.de, http://www.ufz.de/index.php?de=40881 (1)
Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, China (1)
University of Vienna, Austria (1)
Department of Molecular Ecology MPI for Marine Microbiology Celsiusstr. 1 D-28359 Bremen Germany (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (1)
Molecular Systems Biology (MOSYS), Department of Functional and Evolutionary Ecology, University of Vienna, Austria (1)
University of Vienna, Dept. of Functional and Evolutionary Ecology, Div. Molecular Systems Biology (1)
System Ecology Group Luxembourg Centre for Systems Biomedicine University of Luxembourg Luxembourg (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany (1)
Division of Geological and Planetary Sciences, California Institute of Technology, USA (1)
University of Vienna, Dept. of Ecogenomics and Systems Biology (1)
university of vienna dep. of Ecogenomics and systems biology (1)

IsPrivate

False (3)

Submitter Keywords

Manuscript Accepted (1)

Classification

bacteria (8)
viruses (4)

Study type

Transcription profiling by array (25)
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Other (1)
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Release Date

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Systematic Metaproteomic Mapping of Ex vivo Gut Microbiota Functional Responses to Therapeutic Drugs (2)

Some therapeutic compounds can influence our gut microbiota, but a comprehensive understanding of their impact on microbial systems ecology remains largely unexplored. This study examines the impact of 312 therapeutic compounds on metaproteomes of six ex vivo human gut microbiota, generating 4.6 mil...

ORGANISM(S): human gut metagenome

2025-08-28 | PXD056930 | Pride