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Metabolic control analysis is being exploited in a systems biology study of the eukaryotic cell. Using chemostat culture, we have measured the impact of changes in flux (growth rate) on the transcriptome, proteome, endometabolome and exometabolome of the yeast Saccharomyces cerevisiae. Each function...
2012-04-19 | MTBLS8 | MetaboLights
This a model from the article: Network-level analysis of light adaptation in rod cells under normal and altered conditions. Dell'Orco D, Schmidt H, Mariani S, Fanelli F Mol Biosyst2009 Oct; 5(10):1232-46 19756313, Abstract: Photoreceptor...
2024-09-02 | BIOMD0000000326 | BioModels

Gastrodia elata Blume (GE) has been widely used to treat various central and peripheral nerve diseases, and P-Hydroxybenzaldehyde (PHBA) is one of the indicative components of GE brain protection. Since the previous study of our group found that PHBA has a good effect on protecting mitoc...

2024-07-04 | MTBLS7870 | MetaboLights
A systems-level analysis of bile acids effects on rat colon epithelial cells
Mesenchymal stem/stromal cells (MSCs) are self-renewing multipotent cells with regenerative, secretory and immunomodulatory capabilities that are beneficial for the treatment of various diseases. To avoid the issues that come with using tissue-derived MSCs in therapy, MSCs may be generated by the di...
ORGANISM(S): Homo sapiens (Human) 
2019-07-23 | PXD004652 | Pride
A Mathematical Model of Metabolism and Regulation Provides a Systems-Level View of the Oxygen Response of Escherichia coli
2014-03-18 | 23 | FAIRDOMHub
Wound healing in aged skin exhibits systems-level alterations in cellular composition and cell-cell communication
Despite continual efforts to rationalize a prognostic stratification of patients with esophageal adenocarcinoma (EAC) before treatment, current staging system only shows limited success owing to the lack of molecular and genetic markers that reflect prognostic features of the tumor. To develop molec...
ORGANISM(S): Homo sapiens 
Purpose: Spinal cord injury (SCI) is a devastating neurological disease without effective treatment. To generate a comprehensive view of the mechanisms involved in SCI pathology, we applied RNA-sequencing (RNA-seq) technology to characterize the temporal changes in global gene expression after contu...
ORGANISM(S): Mus musculus 
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