Taylor J J - OmicsDI

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Unknown (9557)
Genomics (192)
Transcriptomics (160)
Proteomics (159)
Metabolomics (36)
Models (6)
Genomic (6)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (264)
Aerococcus urinae NBRC 15544 = CCUG 36881 (129)
Allexis (129)
Canis lupus familiaris (129)
Carya cathayensis (129)
Clostridioides difficile 630 (129)
Cyanophora paradoxa (129)
Mus musculus (47)
Rattus norvegicus (6)
Solanum tuberosum (5)
Arabidopsis thaliana (4)
Arabidopsis (3)
Macaca mulatta (2)
Sus scrofa (2)
Drosophila melanogaster (2)
Caenorhabditis elegans (2)
Populus tomentosa (1)
Bombyx mori (1)
Pan troglodytes (1)
Monodelphis domestica (1)
Toxoplasma gondii (1)
Chlamydomonas reinhardtii (1)
Picea glauca (1)
Mycobacterium avium (1)
Cyprinus carpio (1)
Klebsiella pneumoniae (1)
Staphylococcus aureus (1)
Hordeum vulgare (1)
Vibrio cholerae (1)
Danio rerio (1)

Organisms

Caenorhabditis elegans (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (180)
EGA (169)
pride (129)
MetaboLights (33)
MassIVE (26)
dbGaP (6)
BioModels (5)
ENA (5)
GNPS (3)
PAXDB (3)
FAIRDOMHub (1)
geo (1)
GPMDB (1)

Tissue

Cell culture (28)
Brain (11)
Epithelial cell (8)
Lung (8)
Fibroblast (7)
Blood (5)
Permanent cell line cell (5)
Kidney (4)
Plant cell (4)
Whole body (4)
Blood cell (3)
Blood plasma (3)
Blood serum (3)
Liver (3)
Venom (3)
Colon (2)
Colon epithelial cell (2)
Dental plaque (2)
Embryo (2)
HeLa cell (2)
Heart (2)
Neutrophil (2)
Primary cell (2)
Root (2)
Seed (2)
Skeletal muscle (2)
Sperm (2)
Spleen (2)
Stem cell (2)
B-lymphocyte (1)

Disease

Breast cancer (4)
Brain cancer (3)
Colon cancer (3)
Normal (2)
Medulloblastoma (2)
Childhood medulloblastoma (2)
Mitochondrial metabolism disease (2)
Non-small cell lung carcinoma (2)
Prostate adenocarcinoma (2)
Post-stasis (1)
Infiltrating ductal carcinoma (1)
Colon cancer metastasis (1)
Not Available (1)
Acute leukemia (1)
Amyotrophic lateral sclerosis (1)
Brain glioblastoma multiforme (1)
Bronchiectasis (1)
Disease free (1)
Lung benign neoplasm (1)
Lung cancer (1)
Lung non-squamous non-small cell carcinoma (1)
Myelodysplastic syndrome (1)
Neuroblastoma (1)
Neurological dysfunction (1)
Obesity (1)
Parkinson's disease (1)
Pulmonary hypertension (1)
Rheumatoid arthritis (1)

Technology Type

Mass Spectrometry (129)
Shotgun proteomics (61)
Bottom-up proteomics (31)
Mass spectrometry (29)
Affinity purification coupled with mass spectrometry proteomics (19)
Gel-based experiment (15)
Data-dependent acquisition (9)
Illumina 15K (8)
Data-independent acquisition (6)
Illumina HiSeq 2000 (5)
NMR spectroscopy (5)
SWATH MS (5)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (2)
Top-down proteomics (2)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina OncoArray (1)
Affymetrix OncoScan FFPE Express (1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, HumanMethylation450k Bead Chip - Genome Studio, Illumina Genome Analyzer IIx (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Mass spectrometry assay (1)
HDMSE (1)
MSE (1)
Proteogenomics (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (8)
Q Exactive (6)
LTQ Orbitrap Velos (5)
Illumina NovaSeq 6000 (4)
Orbitrap Fusion Lumos (4)
Q Exactive Plus (4)
Orbitrap Exploris 480 (4)
Illumina HiSeq 2000 (3)
6510 Quadrupole Time-of-Flight LC/MS (3)
Illumina HiSeq 4000 (2)
Agilent 5975C Series GC/MSD (2)
Q Exactive GC-MS Orbitrap (Thermo Scientific) (2)
Q Exactive HF (2)
Illumina-compatible library preparation equipment (1)
Monarch RNA purification column system (1)
Standard mammalian cell culture equipment (1)
10x machine (1)
G2505B scanner (Agilent) (1)
Agilent G2505B Scanner (1)
GenePix 4000A [Axon Instruments] (1)
NanoDrop (1)
NextSeq 500 (1)
Instrument (1)
Agilent 6530 Accurate-Mass (1)
Agilent 6530 Accurate-Mass Q-TOF LC/MS (1)
LTQ Orbitrap Elite (1)
Orbitrap Eclipse (1)
Orbitrap Fusion (1)
Synapt G2 MS (1)
TimsTOF Pro (1)

Publication Date

2024 (32)
2010 (32)
2025 (28)
2012 (27)
2021 (26)
2015 (25)
2014 (24)
2022 (23)
2020 (22)
2013 (22)
2011 (18)
2023 (18)
2016 (14)
2017 (13)
2019 (12)
2018 (12)
2026 (9)
2009 (8)
2008 (7)
2005 (4)
2007 (2)
2006 (2)
2004 (1)

UNIPROT ID/AC

Q93WK5 (3)
Q8L500 (3)
Q9LKL2 (3)
O81713 (3)
272620.KPN_04357 (3)
5DNU_KLEP7 (3)
6PGL_KLEP7 (3)
A6T4E2_KLEP7 (3)
A6T4E4_KLEP7 (3)
A6T4E8_KLEP7 (3)
A6T4E9_KLEP7 (3)
A6T4F0_KLEP7 (3)
A6T4F7_KLEP7 (3)
A6T4F8_KLEP7 (3)
A6T4F9_KLEP7 (3)
A6T4G0_KLEP7 (3)
A6T4G2_KLEP7 (3)
A6T4H9_KLEP7 (3)
A6T4I0_KLEP7 (3)
A6T4I1_KLEP7 (3)
A6T4I2_KLEP7 (3)
A6T4I4_KLEP7 (3)
A6T4I6_KLEP7 (3)
A6T4I8_KLEP7 (3)
A6T4I9_KLEP7 (3)
A6T4J0_KLEP7 (3)
A6T4J1_KLEP7 (3)
A6T4J2_KLEP7 (3)
A6T4J5_KLEP7 (3)
A6T4K4_KLEP7 (3)

CHEBI ID

CHEBI:15428 (11)
CHEBI:30769 (10)
CHEBI:16977 (9)
CHEBI:6650 (9)
CHEBI:17154 (9)
CHEBI:18019 (9)
CHEBI:32816 (9)
CHEBI:30915 (9)
CHEBI:17191 (9)
CHEBI:15603 (9)
CHEBI:16643 (9)
CHEBI:17895 (9)
CHEBI:17295 (9)
CHEBI:15741 (8)
CHEBI:17268 (8)
CHEBI:17115 (8)
CHEBI:16335 (8)
CHEBI:17568 (8)
CHEBI:17203 (8)
CHEBI:17306 (8)
CHEBI:16704 (8)
CHEBI:16857 (8)
CHEBI:18012 (8)
CHEBI:16414 (8)
CHEBI:15756 (8)
CHEBI:17992 (7)
CHEBI:18257 (7)
CHEBI:16695 (7)
CHEBI:16708 (7)
CHEBI:33699 (3)

Metabolite Name

L-Phenylalanine (7)
Acetoacetic acid (6)
D-Glucose (6)
L-Alanine (6)
Uracil (6)
L-Proline (6)
Ornithine (6)
Succinic acid (6)
Palmitic acid (6)
L-Valine (6)
L-Isoleucine (6)
L-Leucine (6)
L-Methionine (6)
L-Tyrosine (6)
3-Phosphoglyceric acid (5)
Pelargonic acid (5)
D-Fructose (5)
Oxoglutaric acid (5)
Heptadecanoic acid (5)
Beta-Alanine (5)
Glycine (5)
FAD (5)
Phosphoenolpyruvic acid (5)
Thymine (5)
L-Lysine (5)
L-Aspartic acid (5)
Maleic acid (5)
Capric acid (5)
L-Asparagine (5)
L-Threonine (5)

First Public Date

2014 (2)
2025 (1)
2020 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (4)
Other (1)

Lab affiliation

Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, London, W12 0BZ, UK The Francis Crick Institute, London, NW1 1AT, UK (4)
University of Arizona, Department of Entomology (3)
Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Department of Cell and Molecular Biology, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA. (2)
Keck MS & Proteomics Resource Yale School of Medicine (2)
Liverpool John Moores University (2)
Max Planck Institute for the Science of Human History (2)
Mitochondrial Research Group, Faculty of Medical Sciences, Newcastle University, UK (2)
Senior Director, Dynamic Omics, CGR, One Medimmune Way Gaithersburg, MD 20878 (2)
Sequence database group (2)
The Hospital For Sick Children, Program in Molecular Structure and Function, Princess Margaret Cancer Centre, and Department of Molecular Genetics, University of Toronto. Peter Gilgan Centre for Research and Learning, 686 Bay Street, Toronto M5G 0A4, Canada (2)
The Hospital for Sick Children (2)
(Head, NHS Highly Specialised Mitochondrial Diagnostic Laboratory and Professor of Mitochondrial Pathology), Wellcome Centre for Mitochondrial Research, Newcastle University, UK (1)
143 Food Industry Complex, Food Allergy Research and Resource Program, Department of Food Science and Technology, University of Nebraska-Lincoln , Lincoln, Nebraska 68583-0919, United States (1)
1Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, 3010, Australia 2Murdoch Children’s Research Institute, Melbourne, VIC 3052, Australia 3Victorian Clinical Genetics Services, Murdoch Children’s Research Institute, Melbourne, VIC, 3052, Australia (1)
Arvinas Operations, Inc., 5 Science Park, 395 Winchester Avenue, New Haven, Connecticut 06511 United States (1)
Assistant Professor, Departments of Oncology & Pathology, McGill University Principal Investigator, Cancer Research Program, MUHC-RI 1001 Decarie Blvd, EM2.2218 514.934.1934 ext 76307 Montréal, Canada (1)
Associate Professor in Molecular Reproductive Biology, Discovery and Translational Sciences Department, Leeds Institute of Cardiovascular and Metabolic Medicine (LICAMM), Faculty of Medicine and Health Sciences, University of Leeds, UK (1)
Australian National University, ACT, Australia (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive CCSR 3205b Stanford, CA 94305-5175 (1)
Boston Childrens Hospital Harvard Medical School (1)
Center for Cancer and Immunology Research, Children’s Research Institute, Children’s National Health System (1)
Centre for Regenerative Medicine (CRM), Institute for Regeneration and Repair (IRR), University of Edinburgh (1)
Chemical Biology Department, Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Rössle-Strasse 10, 13125 Berlin, Germany. Department of Chemistry, Humboldt Universität zu Berlin, Brook-Taylor-Straße 2, 12489 Berlin, Germany (1)
Chromatin Structure & Mobile DNA Laboratory, The Francis Crick Institute, London, NW1 1AT, UK. (1)
Colorado Center for Reproductive Medicine, CO, USA (1)
Columbia University, Department of Biochemistry and Molecular Biophysics, USA (1)
Department of Anatomy Cell Biology & Physiology Indiana University School of Medicine. Neurosciences Research Building 320 W. 15th Street, NB-214G Indianapolis, IN 46202 (1)
Department of Anesthesiology and Critical Care Medicine Children’s Hospital of Philadelphia University of Pennsylvania Philadelphia, Pennsylvania (1)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, 3010, Australia 2Murdoch Children’s Research Institute, Melbourne, VIC 3052, Australia 3Victorian Clinical Genetics Services, Murdoch Children’s Research Institute, Melbourne, VIC, 3052, Australia (1)

IsPrivate

False (5)

Submitter Keywords

Immuno-oncology (1)

Modification

Not available (2)

Study type

Transcription profiling by array (102)
RNA-seq of coding RNA (20)
ChIP-seq (15)
Methylation profiling by array (11)
Comparative genomic hybridization by array (8)
Unknown experiment type (7)
Genotyping by array (3)
RNA-seq of coding RNA from single cells (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Proteomic profiling by mass spectrometer (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
Other (1)
DNA-seq (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (1038)
2021 (945)
2023 (916)
2025 (915)
2024 (837)
2020 (723)
2019 (664)
2018 (591)
2017 (479)
2015 (449)
2016 (410)
2014 (340)
2013 (261)
2012 (243)
2011 (209)
2010 (188)
2026 (140)
2009 (127)
2008 (78)
2007 (68)
2006 (30)
2005 (29)
2004 (16)
2003 (16)
2002 (6)
2000 (5)
2001 (4)
1998 (3)
1999 (2)
1997 (2)

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Structural basis of J cochaperone binding and regulation of Hsp70.

Not available

S-EPMC2096417 | biostudies-literature

Synthetic lethal interactions in yeast reveal functional roles of J protein co-chaperones.

Not available

S-EPMC3463740 | biostudies-literature

Enantioselective Total Synthesis of the Putative Biosynthetic Intermediate Ambruticin J.

Not available

S-EPMC8328920 | biostudies-literature

Structures of the PKA RIα Holoenzyme with the FLHCC Driver J-PKAcα or Wild-Type PKAcα.

Not available

S-EPMC6506387 | biostudies-literature

Mutational analysis of photosystem I of Synechocystis sp. PCC 6803: the role of four conserved aromatic residues in the j-helix of PsaB.

Not available

S-EPMC3171458 | biostudies-literature

Exploring the influence of synaptic density and anxiety on pain perception: evidence from a [11C]UCB-J positron emission tomography imaging study.

Not available

S-EPMC12289550 | biostudies-literature

Low Molecular Weight Allergens from English Walnut (Juglans Regia)

Low molecular weight (LMW) proteins were purified from English walnuts (J. regia cv. Chandler). The LMW proteins were separated by anion exchange chromatography. The anion exchange fractions were analyzed by SDS-PAGE, and protein bands were excised. In gel trypsin digestion was conducted (following ...

ORGANISM(S): Juglans regia (English walnut)

2019-11-28 | PXD000634 | Pride

Native Taylor/Non-Taylor Dispersion-Mass Spectrometry (TNT-MS) Allows Rapid Protein Desalting and Multiplexed, Label-Free Ligand Screening.

Not available

S-EPMC12825326 | biostudies-literature

Transcription profiling by array of wild type and Pcsk5 Vcc mutant mouse embryos

We have identified an ENU-induced recessive mouse mutation (Vcc) with a pleiotropic phenotype overlapping including cardiac, tracheo-esophageal, anorectal, axial skeletal antero-posterior patterning defects, limb malformations, presacral mass, renal and palatal agenesis, and pulmonary hypoplasia. It...

ORGANISM(S): Mus musculus

2008-06-27 | E-TABM-443 | biostudies-arrayexpress

Contamination of the hospital environment with gastroenteric viruses: comparison of two pediatric wards over a winter season.

Not available

S-EPMC2546731 | biostudies-literature

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