Sort   by:  
 Page size 
TranscriptomicsRNA-seq of roots of Schrenkiella parvula seedlings treated with 0mM or 175mM NaCl for 0 h, 3 h, 24 h and 48 h.
The purpose of the experiments is to understand transcriptional reprogramming in roots of halophyte Schrenkiella parvula (S. parvula) that may contribute to its high salt tolerance. Root materials were harvested from S. parvula seedlings grown on agar plates with ½ strength Murashige-Skoog (½MS) med...
2023-02-18 | E-MTAB-12424 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment.
The purpose of this experiment was to investigate the downstream evens of Arabidopsis subclass 1 SnRK2 protein kinases signaling pathway. Seedlings were grown in 100 ml liquid media containing 0.5xMurashi-Skoog basal salt, 0.5% sucrose, 1% M.E.S. monohydrate, pH 5.8 (KOH) with shaking (120 rpm). Ten...
ORGANISM(S): Arabidopsis thaliana 
2019-07-11 | E-MTAB-8073 | biostudies-arrayexpress
TranscriptomicsThe effect of SAUERKRAUT and salt on the floral transition in the shoot apex
This dataset identifies genes expressed in florally induced meristems of Col-0 and skrt-2 plants, in control conditions and during salt stress. It allows us to identify how skrt-2 and salt affect the timing of the floral transition, and how the floral transition itself is regulated.
ORGANISM(S): Arabidopsis thaliana 
2026-09-11 | E-MTAB-16910 | biostudies-arrayexpress
TranscriptomicsRNA-seq experiment of tissue forming a lateral root after salt treatment in cyp79b2/b3 mutants containing multiple timepoints
We aimed to investigate the transcriptional changing in developing lateral roots in response to salt and cyp79b2/b3 mutation. Seedlings were turned (gravistimulation) to induce the formation of a lateral in the bending zone of the main root due to a local auxin maximum. These bending zones were diss...
ORGANISM(S): Arabidopsis thaliana 
2024-11-30 | E-MTAB-13311 | biostudies-arrayexpress
TranscriptomicsRNAseq of temperature and osmotic stress on detached root of Arabidopsis thaliana col-0 and snrk2.2/2.3
Examine the transcriptomic landscape induced by warm temperature and osmotic stress and its dependency on ABA in Arabidopsis detached roots.
ORGANISM(S): Arabidopsis thaliana 
2025-05-21 | E-MTAB-15125 | biostudies-arrayexpress
TranscriptomicsRNAseq of dark dissected, 3 day old Arabidopsis (col0) seedlings, including cotyledons, apical hooks and hypocotyls
Seedling establishment is a critical developmental transition that contributes to survival in the local environment. While light is the primary cue driving de-etiolation, how abiotic stress shapes early development in darkness remains unclear. We show that salinity induces a photomorphogenic-like re...
ORGANISM(S): Arabidopsis thaliana 
2026-06-23 | E-MTAB-16552 | biostudies-arrayexpress
TranscriptomicsRNA-seq of Arabidopsis root samples in response to salt, osmotic and control conditions at multiple timepoints with multiple genotypes
This experiment was performed to study (1) the temporal regulation of transcriptional changes during salt stress in Arabidopsis roots and (2) salt-induced transcriptional changes in Arabidopsis mutant roots compared with Col-0.
ORGANISM(S): Arabidopsis thaliana 
2024-09-25 | E-MTAB-13709 | biostudies-arrayexpress
TranscriptomicsRoot transcriptomic response of three potato cultivars (Desirée, Innovator, Mozart) to salt stress (NaCl=125mM) after 6h and 24h
This experiment aims to compare the transcriptomic response of three potato potato cultivars to salt stress. Plants were grown in hydroponic conditions (0.5MS +0.05MES) with long day light cycle (16h/8h). Roots were collected at ZT10 (time point 6h) and the following day at ZT4 (time point 24h). Th...
ORGANISM(S): Solanum tuberosum 
2025-03-13 | E-MTAB-14181 | biostudies-arrayexpress
Sort   by:  
 Page size