OmicsDI
Toggle navigation
Browse
Submit Data
Databases
API
Help
Advanced
Search
30380
Results
Show all
Save search
Copy query
Show results for
Unknown
(25256)
Proteomics
(2303)
Transcriptomics
(1412)
Genomics
(1228)
Metabolomics
(91)
Genomic
(29)
Models
(25)
Other
(24)
Methylation profiling
(10)
Multiomics
(2)
Organisms
Mus musculus
(810)
Homo sapiens
(625)
Caenorhabditis elegans
(102)
Rattus norvegicus
(57)
Arabidopsis thaliana
(27)
Xenopus laevis
(21)
Drosophila melanogaster
(19)
Danio rerio
(16)
Saccharomyces cerevisiae
(15)
Gallus gallus
(13)
Sus scrofa
(13)
Streptococcus agalactiae
(11)
Bos taurus
(11)
Escherichia coli
(9)
Daphnia pulex
(9)
cellular organisms
(6)
Macaca mulatta
(5)
synthetic construct
(5)
Staphylococcus aureus
(4)
Oryza sativa
(4)
Apis mellifera
(3)
Escherichia coli K-12
(3)
Helicobacter pylori
(2)
Thermoanaerobacter sp. X514
(2)
Meleagris gallopavo
(2)
Mus sp.
(1)
Bacteria
(1)
Vertebrata
(1)
Leishmania
(1)
Mammalia
(1)
Organisms
Mus musculus
(387)
Homo sapiens
(203)
Rattus norvegicus
(17)
Xenopus laevis
(10)
Drosophila melanogaster
(10)
Sus scrofa
(8)
Danio rerio
(8)
Aquarana catesbeiana
(5)
Pyricularia oryzae
(4)
Triticum aestivum
(4)
Arabidopsis thaliana
(4)
Thinopyrum elongatum
(3)
Trichoderma harzianum
(3)
Ovis aries
(3)
Macaca mulatta
(3)
Caenorhabditis elegans
(3)
Bos taurus
(3)
Streptococcus agalactiae
(2)
Bemisia tabaci
(2)
Hydrogenophilus thermoluteolus
(2)
Mus
(2)
Prunus persica
(2)
Equus caballus
(2)
feces metagenome
(2)
mouse gut metagenome
(2)
Haemophilus influenzae PittJJ
(1)
Streptococcus gordonii
(1)
Dengue virus
(1)
Cryptococcus neoformans H99
(1)
Proteus mirabilis
(1)
Repository
pride
(2009)
biostudies-arrayexpress
(1120)
ENA
(930)
geo
(579)
MassIVE
(201)
MetaboLights
(79)
jPOST
(72)
EGA
(37)
dbGaP
(29)
BioModels
(24)
iProX
(19)
GNPS
(10)
PAXDB
(5)
PanoramaPublic
(3)
MetabolomicsWorkbench
(2)
PeptideAtlas
(2)
ExpressionAtlas
(1)
FAIRDOMHub
(1)
GPMDB
(1)
Tissue
Cell culture
(440)
Epithelial cell
(150)
Brain
(112)
Permanent cell line cell
(74)
Liver
(73)
Blood plasma
(52)
Blood
(52)
Fibroblast
(46)
Lung
(44)
Heart
(40)
HeLa cell
(35)
Kidney
(35)
T cell
(34)
Cell suspension culture
(32)
Blood cell
(29)
B cell
(26)
Blood serum
(25)
Stem cell
(25)
Whole body
(25)
Hepatocyte
(25)
Colon
(24)
Macrophage
(22)
Embryonic stem cell
(21)
Skin
(21)
Bone marrow
(21)
Embryo
(19)
Primary cell
(18)
Leukocyte
(15)
Epithelial cells
(1)
Blood
(1)
Disease
Breast cancer
(49)
Disease free
(36)
Colon cancer
(24)
Cervix carcinoma
(23)
Neuroblastoma
(7)
Multiple myeloma
(7)
Normal
(5)
Spinal muscular atrophy
(3)
Acute lymphoblastic leukemia
(2)
Cancer
(2)
Peptic ulcer disease
(1)
Duodenal ulcer
(1)
Bacterial infectious disease
(1)
Adenoma
(1)
Breast Carcinoma
(1)
Monoclonal gammopathy of unknown significance (MGUS)
(1)
Not applicable
(1)
Mild asthma
(1)
Benign Prostatic Hyperplasia
(1)
Myeloma
(1)
Chronic granulomatous disease
(1)
IRAK-4 Q293X mutation
(1)
Small cell lung carcinoma
(1)
Unaffected
(1)
S enteritidis
(1)
Collagen induced arthritis
(1)
Type 1 diabetes mellitus (DM-1)
(1)
Healthy
(1)
Colorectal Cancer
(1)
Not Available
(1)
Technology Type
Mass Spectrometry
(2011)
Shotgun proteomics
(1024)
Bottom-up proteomics
(432)
Data-independent acquisition
(226)
Data-dependent acquisition
(218)
Affinity purification coupled with mass spectrometry proteomics
(192)
SWATH MS
(86)
Gel-based experiment
(76)
Chemical cross-linking coupled with mass spectrometry proteomics
(63)
Mass spectrometry
(59)
Top-down proteomics
(57)
DiaPASEF
(31)
SRM/MRM
(30)
Mass spectrometry assay
(17)
Affinity proteomics
(8)
Immunopeptidomics
(6)
All-ion fragmentation
(6)
MSE
(5)
HDMSE
(4)
NMR spectroscopy
(3)
Proteogenomics
(3)
Mass spectrometry imaging
(3)
ESI
(2)
Metaproteomics
(2)
Affymetrix Axiom Genome-Wide ASI 1 Array
(1)
Illumina HiSeq 2000 (ILLUMINA), Illumina HiSeq 1500 (ILLUMINA)
(1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA
(1)
SomaScan affinity proteomics
(1)
Olink affinity proteomics
(1)
Glycoproteomics
(1)
Instrument Platform
Illumina NovaSeq 6000
(26)
Illumina HiSeq 2500
(21)
Illumina HiSeq 2000
(13)
Illumina HiSeq 4000
(10)
NextSeq 550
(7)
NextSeq 500
(7)
NextSeq 2000
(4)
Illumina MiSeq
(3)
BD FACS Aria III
(2)
The Agilent scanner G2565BA
(2)
Agilent�s Microarray Hybridization Oven
(2)
NanoDrop ND-1000 Spectrophotometer (NanoDrop Technologies)
(2)
Other
(2)
GenePix 4000A [Axon Instruments]
(2)
Scanning hardware
(2)
Illumina NovaSeq X
(2)
Illumina HiSeq 1500
(2)
Illumina NOVAseq 6000
(1)
DNBSEQ Eukaryotic Stranded Transcriptome library preparation- Stranded mRNA Library
(1)
Agilent Surescan High Resolution DNA microarray Scanner
(1)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson)
(1)
Fluidigm C1 autoprep system
(1)
454 GS FLX
(1)
IScan Illumina
(1)
Covaris S220
(1)
Agilent G2565BA
(1)
GeneChip Scanner 3000 [Affymetrix]
(1)
Spectronic Helios Alpha UV-Vis spectrophotometer
(1)
Other
(1)
Illumina Genome Analyzer IIx
(1)
Publication Date
2025
(463)
2024
(403)
2023
(362)
2026
(351)
2022
(339)
2021
(256)
2020
(255)
2011
(183)
2015
(170)
2013
(166)
2014
(162)
2019
(161)
2016
(155)
2012
(149)
2018
(114)
2010
(111)
2017
(97)
2008
(75)
2009
(58)
2005
(26)
2007
(21)
2006
(14)
2004
(4)
2003
(1)
UNIPROT ID/AC
Q99JB6
(2)
P42227
(2)
P08505
(2)
P51617
(2)
Q99836
(2)
P01579
(2)
P08887
(2)
P42224
(2)
P28482
(2)
Q07889
(2)
Q9BRQ8
(1)
A0A061RQ89
(1)
O64645
(1)
Q9VEZ5
(1)
Q9V3Q6
(1)
Q87041
(1)
Q9Y2C9
(1)
P28700
(1)
P70284
(1)
Q9WVS0
(1)
Q04683
(1)
Q9ES17
(1)
P18893
(1)
P07750
(1)
P04351
(1)
P42232
(1)
Q60636
(1)
P41183
(1)
P06332
(1)
Q12933
(1)
ENSEMBL ID
ENSMUSG00000027651
(1)
ENSMUSG00000072849
(1)
ENSMUSP00000141097
(1)
CHEBI ID
CHEBI:15996
(6)
CHEBI:33699
(4)
CHEBI:24875
(2)
CHEBI:36080
(2)
CHEBI:17552
(2)
CHEBI:73623
(1)
CHEBI:18248
(1)
CHEBI:26536
(1)
CHEBI:27406
(1)
CHEBI:27499
(1)
CHEBI:28433
(1)
CHEBI:27510
(1)
CHEBI:9907
(1)
CHEBI:15436
(1)
CHEBI:27484
(1)
CHEBI:27999
(1)
CHEBI:28728
(1)
CHEBI:15627
(1)
CHEBI:15908
(1)
ChEBI:CHEBI:17855
(1)
CHEBI:35896
(1)
CHEBI:16144
(1)
CHEBI:28593
(1)
CHEBI:28922
(1)
CHEBI:28852
(1)
CHEBI:34939
(1)
CHEBI:27696
(1)
CHEBI:27555
(1)
CHEBI:17507
(1)
CHEBI:15546
(1)
Metabolite Name
Creatine
(12)
Uric acid
(10)
Hexadecanedioic acid
(9)
Tetradecanedioic acid
(9)
Azelaic acid
(9)
Succinic acid
(9)
Allantoin
(8)
Cholic acid
(8)
L-Tyrosine
(8)
Citric acid
(8)
Thymidine
(8)
Uridine
(8)
4-Pyridoxic acid
(7)
Citrulline
(7)
Choline
(7)
Taurine
(7)
Xanthosine
(7)
Elaidic acid
(7)
Deoxycholic acid
(7)
Traumatic acid
(7)
Phenylalanine
(7)
L-Glutamine
(7)
Glutaric acid
(7)
Suberic acid
(7)
Dodecanedioic acid
(7)
Pantothenic acid
(7)
Xanthine
(7)
Guanosine
(7)
Inosine
(7)
Luteolin
(6)
First Public Date
2024
(126)
2014
(123)
2025
(94)
2023
(88)
2026
(75)
2020
(74)
2022
(70)
2021
(62)
2017
(47)
2019
(46)
2015
(35)
2018
(33)
2016
(31)
2013
(25)
2011
(1)
Modelling Approach
Ordinary differential equation model
(20)
Logical model
(2)
Differential equation model
(1)
Constraint-based model
(1)
Lab affiliation
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic
(22)
The Institute of Cancer Research
(19)
Functional Proteomics, ICR
(19)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK
(12)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany
(12)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(11)
CNIO
(10)
Karolinska Institutet, Stockholm, Sweden
(10)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne
(9)
Cambridge Institute for Medical Research, University of Cambridge
(9)
Wellcome Trust Sanger Institute
(9)
Harvard Medical School
(8)
Professor, Deputy Head of Centre Novo Nordisk Foundation Center for Protein Research University of Copenhagen Copenhagen, DENMARK
(7)
Department of Cell Biology, Harvard Medical School, Boston MA 02115 USA
(7)
Institute of Cancer Research, London
(7)
The Institute of Cancer Research, London
(7)
David H. Koch Institute for Integrative Cancer Research Howard Hughes Medical Institute Massachusetts Institute of Technology Cambridge, MA 02139, USA
(6)
Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA
(6)
Plateforme Oncoprot, TBM-Core US 005, F-33000 Bordeaux, France
(6)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India
(6)
Utrecht University
(6)
IGMM, CNRS, Université de Montpellier, Montpellier, France
(5)
Department of Proteomics and Signal Transduction, Systems Biology of Membrane Trafficking Research Group, Max-Planck Institute of Biochemistry, Martinsried, Germany
(5)
Department of Cell Biology, Harvard Medical School, Boston, MA 02115 USA
(5)
Departamento de Bioquímica y Biología Molecular. Edificio Severo Ochoa, planta 1, ala Este. Campus de Rabanales. Universidad de Córdoba. 14071-Córdoba. Spain.
(5)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE
(5)
Department of Chemistry, National and Kapodistrian University of Athens, 15784 Zografou, Greece
(5)
IGMM, CNRS, Univ Montpellier, Montpellier, France
(5)
Karolinska Institutet
(5)
CECAD, University of Cologne
(5)
Tags
pathogen
(12)
pathogen:bacterium
(10)
pathogen:virus
(1)
pathogen:fungus
(1)
IsPrivate
False
(24)
Submitter Keywords
Immuno-oncology
(3)
Classification
bacteria
(10)
viruses
(1)
fungi
(1)
Modification
4-tetrahydrothiazine-3-carboxylic acid
(4)
Not available
(3)
2x(15)N labeled L-lysine
(2)
4x(15)N labeled L-arginine
(2)
56.026215
(1)
59.036279
(1)
4x(2)H labeled dimethylated residue
(1)
-17.026549
(1)
42.010565
(1)
15.994915
(1)
6x(2)H labeled dimethylated L-arginine
(1)
N6
(1)
+3amu)
(1)
Study type
Transcription profiling by array
(639)
ChIP-seq
(164)
RNA-seq of coding RNA
(152)
Methylation profiling by array
(20)
RNA-seq of coding RNA from single cells
(19)
Methylation profiling by high throughput sequencing
(19)
Other
(14)
Unknown experiment type
(12)
RNA-seq of non coding RNA
(12)
ChIP-chip by tiling array
(11)
Comparative genomic hybridization by array
(7)
MicroRNA profiling by array
(7)
Animal - High-throughput sequencing
(6)
Transcription profiling by SAGE
(4)
Transcription profiling by tiling array
(4)
RNA-seq of total RNA
(4)
Animal - One-color microarray
(3)
Transcription profiling by RT-PCR
(3)
ATAC-seq
(3)
RNAi profiling by array
(2)
ChIP-chip by array
(2)
Transcription profiling by high throughput sequencing
(1)
Translation profiling
(1)
High-throughput sequencing
(1)
Proteomic profiling by mass spectrometer
(1)
MBD-seq
(1)
Bisulfite-seq
(1)
RIP-seq
(1)
Ribo-seq
(1)
Single nucleus RNA sequencing
(1)
Release Date
2022
(2840)
2021
(2575)
2023
(2480)
2020
(2189)
2025
(2167)
2024
(2102)
2019
(1683)
2018
(1509)
2017
(1409)
2016
(1381)
2015
(1232)
2014
(971)
2013
(738)
2012
(660)
2011
(594)
2010
(426)
2009
(326)
2026
(300)
2008
(243)
2007
(146)
2006
(106)
2005
(85)
2004
(55)
2003
(42)
2001
(30)
2002
(29)
1999
(23)
2000
(20)
1998
(9)
1997
(3)
Previous
page
1 / 3038
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
3038
Next
page
Sort
by:
Relevance
Page size
10
Pyricularia oryzae strain:TH 0003 | isolate:TH 0003
Pyricularia oryzae TH 0003 Transcriptome - TH 0003_Pool
PRJNA1360759
|
ENA
Cite
Pyricularia oryzae strain:TH 0003 | isolate:TH 0003
Pyricularia oryzae TH 0003 Transcriptome - Rice_TH 3
PRJNA1361003
|
ENA
Cite
Pyricularia oryzae strain:TH 0003 | isolate:TH 0003
Pyricularia oryzae TH 0003 Transcriptome - YPC_TH 3
PRJNA1360755
|
ENA
Cite
Pyricularia oryzae strain:TH 0003 | isolate:TH 0003
Pyricularia oryzae TH 0003 Transcriptome - Nitrate_TH 3
PRJNA1360757
|
ENA
Cite
Cellulosimicrobium sp. TH-20
Cellulosimicrobium sp. TH-20 Genome sequencing
PRJNA383054
|
ENA
Cite
Lactiplantibacillus plantarum strain:TH-B59
Lactiplantibacillus plantarum strain:TH-B59 Genome sequencing
PRJNA1427941
|
ENA
Cite
CD4+ Th immunogenicity of Ascaris spp.
Application of a reconstituted in vitro system to define the CD4+ Th immunogenicity of complex antigenic mixtures.
ORGANISM(S):
Homo sapiens (Human)
Ascaris suum
2020-03-04
|
PXD015012
|
Pride
Cd4+ th epitope
Mhcii
Ascaris
In vitro
Cite
Azorhizobium caulinodans strain:Th 4A
Azorhizobium caulinodans Th 4A genome sequencing project
PRJDB13442
|
ENA
Cite
Generated different Th cells
Generated different Th cells
PRJNA509418
|
ENA
Cite
Trichoderma harzianum strain:Th-33
Trichoderma harzianum Th-33 Transcriptome or Gene expression
PRJNA272748
|
ENA
Cite
Previous
page
1 / 3038
You're on page
1
page
2
page
3
page
4
page
5
page
...
page
3038
Next
page
Sort
by:
Relevance
Page size
10
OmicsDI
is part of the ELIXIR infrastructure
OmicsDI is an Elixir interoperability service.
Learn more ›
Tweets
