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MetabolomicsIn-situ metabolome of Ramalina farinacea from thalli collected across six European regions during winter and summer
Samples of the model lichen Ramalina farinacea were collected from six sites (countries) across a geographical gradient in Europe: Czech Republic, Estonia, Finland, Norway, Spain, and Sweden. Sampling was carried out in winter (January-March 2023) and summer (June-July 2023), with six individuals co...
2026-07-22 | MTBLS14580 | MetaboLights
TranscriptomicsRNA sequencing to assess the transcriptional dynamics of infection when Fusarium oxysporum f. sp. lycopersici (Fol) WT and erc3 (Early Root Colonisation 3) knock out strain infect Marchantia polymorpha Tak-1 thalli
21 DPI Marchantia polymorpha Tak-1 thalli were infected with Fol WT and erc3 knock out alongside mock(water) control and axenically grown Fol WT culture. At 3 days post infection, thalli were harvested and RNA was extracted. After polyA enrichment, and library preparation, sequencing was carried on...
ORGANISM(S): Marchantia polymorpha subsp. polymorpha 
2026-05-04 | E-MTAB-15091 | biostudies-arrayexpress
TranscriptomicsRNA sequencing for axenically grown Fol and Fo47 fungal cultures as well as Marchantia polymorpha Tak1 thalli infected with these strains
RNA was extracted from axenically grown Fo47 and Fol cultures and Marchantia polymorpha Tak1 thalli infected with these strains at 3DPI. There are 3 biological replicates in each set. Sequencing was carried out using NovaSeq 6000 platform using SP flowcell with 2x100bp sequencing read length.
ORGANISM(S): Fusarium oxysporum 
2026-05-04 | E-MTAB-15092 | biostudies-arrayexpress
UnknownIsolation of Native Arbuscular Mycorrhizal Fungi within Young Thalli of the Liverwort Marchantia paleacea.
Not available
S-EPMC6631804 | biostudies-literature
UnknownCells tile a flat plane by controlling geometries during morphogenesis of Pyropia thalli.
Not available
S-EPMC5429738 | biostudies-literature
GenomicsMetagenomic libraries produced from intact thalli of Xanthoria parietina
Metagenomic libraries produced from intact thalli of Xanthoria parietina
PRJEB78723 | ENA
GenomicsExpression levels in different parts of Xanthoria parietina thalli
Expression levels in different parts of Xanthoria parietina thalli
PRJEB38537 | ENA
GenomicsRNA sequencing for axenically grown Fol and Fo47 fungal cultures as well as Marchantia polymorpha Tak1 thalli infected with these strains
RNA sequencing for axenically grown Fol and Fo47 fungal cultures as well as Marchantia polymorpha Tak1 thalli infected with these strains
PRJEB88914 | ENA
UnknownThe long-term effect of removing the UV-protectant usnic acid from the thalli of the lichen Cladonia foliacea.
Not available
S-EPMC9433529 | biostudies-literature
UnknownFunctional ecological traits in young and adult thalli of canopy-forming brown macroalga Gongolaria barbata (Phaeophyta) from a transitional water system.
Not available
S-EPMC11402337 | biostudies-literature
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