Thibault C C - OmicsDI

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Unknown (349)
Proteomics (92)
Transcriptomics (41)
Genomics (6)
Metabolomics (3)

Organisms

Schizosaccharomyces pombe (83)
Oryza sativa Indica Group (83)
Sinorhizobium meliloti BL225C (83)
Sus scrofa domesticus (83)
Saccharomyces cerevisiae (83)
Staphylococcus aureus (83)
Rattus norvegicus (83)
Escherichia coli (83)
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Physcomitrium patens (83)
Methylohalobius crimeensis 10Ki (83)
Homo sapiens (83)
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Drosophila (83)
Callinectes sapidus (83)
Mus musculus (18)
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Rattus norvegicus (4)
Saccharomyces cerevisiae (2)
Drosophila melanogaster (2)
Pseudomonas aeruginosa (1)
Arabidopsis thaliana (1)

Organisms

Caenorhabditis elegans (2)
Saccharomyces cerevisiae (1)

Repository

pride (83)
biostudies-arrayexpress (44)
MassIVE (8)
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ENA (3)
PAXDB (1)

Tissue

Cell culture (27)
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Disease

Acute myeloid leukemia (7)
Acute lymphocytic leukemia (4)
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Disease free (3)
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Wild type (1)
Alzheimer's disease (1)
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Non-small cell lung carcinoma (1)
Huntington Disease (1)
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Melanoma (1)
Pancreatic cancer (1)
Colon adenocarcinoma (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (83)
Shotgun proteomics (60)
Bottom-up proteomics (15)
Affinity purification coupled with mass spectrometry proteomics (8)
Data-dependent acquisition (7)
Mass spectrometry (3)
Immunopeptidomics (3)
Gel-based experiment (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Data-independent acquisition (2)
SRM/MRM (2)
Proteogenomics (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive (4)
Illumina HiSeq 2000 (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
Illumina HiSeq 2500 (1)
Orbitrap Fusion ETD (1)
LTQ Orbitrap Elite (1)
TripleTOF 5600 (1)
Orbitrap Fusion (1)
TimsTOF Pro 2 (1)
Q Exactive HF (1)

Publication Date

2025 (14)
2023 (13)
2021 (12)
2018 (12)
2020 (11)
2022 (10)
2014 (9)
2010 (9)
2024 (9)
2015 (6)
2008 (6)
2016 (4)
2012 (4)
2011 (4)
2026 (4)
2013 (3)
2007 (3)
2017 (2)
2019 (2)

UNIPROT ID/AC

Q16MB4_AEDAE (1)
Q16GF8_AEDAE (1)
U518_AEDAE (1)
Q16ZT4_AEDAE (1)
Q17FS9_AEDAE (1)
TRMB_AEDAE (1)
Q17AP0_AEDAE (1)
Q17DX1_AEDAE (1)
Q0C738_AEDAE (1)
Q16PT8_AEDAE (1)
Q17CK8_AEDAE (1)
Q174R6_AEDAE (1)
Q16ML7_AEDAE (1)
Q16LW1_AEDAE (1)
Q171J5_AEDAE (1)
Q16W14_AEDAE (1)
Q16FJ9_AEDAE (1)
Q17MK2_AEDAE (1)
Q1HQZ2_AEDAE (1)
Q16H82_AEDAE (1)
Q17AI9_AEDAE (1)
Q16XR3_AEDAE (1)
Q17CA3_AEDAE (1)
Q17L48_AEDAE (1)
Q175D0_AEDAE (1)
Q17D69_AEDAE (1)
GLYR1_AEDAE (1)
Q17GY9_AEDAE (1)
J9HSX8_AEDAE (1)
Q17N65_AEDAE (1)

CHEBI ID

CHEBI:17822 (3)
CHEBI:26271 (3)
CHEBI:25094 (3)
CHEBI:18237 (3)
CHEBI:27570 (3)
CHEBI:18186 (3)
CHEBI:16811 (3)
CHEBI:18257 (3)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:15428 (3)
CHEBI:16610 (3)
CHEBI:28044 (3)
CHEBI:27266 (3)
CHEBI:16449 (3)
CHEBI:29016 (3)
CHEBI:28623 (2)
CHEBI:84659 (2)
CHEBI:85743 (2)
CHEBI:84662 (2)
CHEBI:84665 (2)
CHEBI:24266 (2)
CHEBI:17992 (2)
CHEBI:88003 (2)
CHEBI:16113 (2)
CHEBI:26984 (2)
CHEBI:33508 (2)
CHEBI:15978 (2)
CHEBI:4170 (2)
CHEBI:15356 (2)

Metabolite Name

Kojibiose (1)
Gulono-1,4-lactone (1)
6-beta-hydroxylithocholate (1)
Tauro-alpha-muricholate (1)
Pro-pro-pro (1)
Valylthreonine (1)
Valyllysine (1)
Threonylisoleucine (1)
Serylserine (1)
Serylalanine (1)
Serylhistidine (1)
Prolylglutamine (1)
Prolylglutamate (1)
Phenylalanylthreonine (1)
Phenylalanylserine (1)
Phenylalanylproline (1)
Leucylproline (1)
Isoleucylproline (1)
Histidylglutamate (1)
Glycylmethionine (1)
Glycylhistidine (1)
Glycylglycine (1)
Glycylasparagine (1)
Aspartylaspartate (1)
Alanylthreonine (1)
Alanyllysine (1)
Alanylglutamine (1)
Alanylalanine (1)
Taurolithocholate (1)
Bilirubin (1)

First Public Date

2021 (1)
2020 (1)
2018 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (30)
Comparative genomic hybridization by array (5)
RNA-seq of coding RNA (4)
ChIP-seq (3)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)

Release Date

2022 (39)
2025 (38)
2021 (36)
2023 (33)
2020 (32)
2024 (31)
2015 (20)
2016 (17)
2018 (16)
2010 (15)
2014 (14)
2019 (14)
2013 (13)
2008 (13)
2012 (11)
2017 (11)
2009 (9)
2011 (9)
2026 (9)
2007 (8)
2006 (4)
2005 (1)

Lab affiliation

Institute for Research in Immunology and Cancer, Department of Biochemistry, Department of Chemistry, Université de Montréal, Québec, Canada H3T 1J4 (24)
IRIC-Université de Montréal (15)
Institute for Research in Immunology and Cancer (IRIC) Université de Montréal, Department of Chemistry, Université de Montréal, MIL campus, Montréal, H2V 0B3, Canada (3)
Centre de Recherche du CHU Ste-Justine (2)
Institute for Research in Immunology and Cancer, Department of Chemistry, Université de Montréal, Montréal, Québec, Canada H3T 1J4 (2)
Institut Pasteur 25 Rue du Docteur Roux Paris 75015 (2)
EDyP (2)
Département d'immunologie et de biologie cellulaire, Faculté de médecine et des sciences de la santé, Université de Sherbrooke (1)
Michael Smith Laboratories, Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC, Canada (1)
1 Institute for Research in Immunology and Cancer, Université de Montréal, Montréal, Canada 2 Department of Chemistry, Université de Montréal, Montréal, Canada (1)
Institute for Research in Immunology and Cancer,Department of Chemistry, Université de Montréal, P.O. Box 6128, Station. Centre-ville, Montréal, Québec, Canada H3C 3J7 (1)
The Perelman School of Medicine at the University of Pennsylvania Epigenetics Institute Department of Biochemistry and Biophysics Philadelphia, USA (1)
Univeristy Of Toronto (1)
Department of Biochemistry and Functional Genomics, Université de Sherbrooke, Sherbrooke, Québec, Canada (1)
University of Melbourne, Florey Institute (1)
All liquid chromatography MS/MS (LC-MS/MS) data were searched against the relevant database using PEAKS 10.5 or Peaks X Pro (Bioinformatics Solution Inc.). For peptide identification, tolerance was set at 10 ppm and 0.01 Da for precursor and fragment ions, respectively. The occurrences of oxidation (M), deamidation and TMT modification were set as variable modifications (1)
Michael Smith Laboratories, The University of British Columbia (1)
Dept. of Biochemistry and Molecular Biology; Michael Smith Laboratories, the University of British Columbia, Canada (1)
Georg-August-University Göttingen Department of Molecular Microbiology and Genetics Institute of Microbiology and Genetics (1)
Maisonneuve-Rosemont Hospital Research Center and Department of Medicine, University of Montréal, Montréal H3C 3J7, Québec, Canada (1)
IRIC - University of Montreal (1)
Centre de recherche hopital Maisonneuve Rosemont (1)
Center of High-throughput Biology, Dept. of Biochemistry and Molecular Biology, UBC (1)
1 Institute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec, Canada. 2 Department of Chemistry, Université de Montréal, Montréal, Québec, Canada. 3 Department of Biochemistry and Molecular Medicine, Université de Montréal, Montréal, Québec, Canada. (1)
Institute for Research in Immunology and Cancer, Québec, Canada, University of Montréal, Department of Chemistry, Québec, Canada (1)
The University of British Columbia (1)
Centre de Recherches en Cancérologie de Toulouse; INSERM U1037, team 17 PI3K isoforms, signalling and cancerogenesis (1)
IRIC - Université de Montréal (1)
1. Institut de Recherche en Immunologie et Cancérologie (IRIC), Université de Montréal, Montréal, Québec, Canada. 2. Département de Biochimie et Biologie Moléculaire, Université de Montréal, Montréal, Québec, Canada. 3. Département de Chimie, Université de Montréal, Montréal, Québec, Canada (1)
IRIC-Universite de Montreal (1)

Tags

xref:PubMed:30333136 (1)
xref:PubMed:32349127 (1)
xref:PubMed:36261415 (1)

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Harnessing full-text publications for deep insights into C. elegans and Drosophila biomaps.

Not available

S-EPMC11562368 | biostudies-literature

The unfolded protein response reverses the effects of glucose on lifespan in chemically-sterilized C. elegans.

Not available

S-EPMC9582010 | biostudies-literature

A focus reduction neutralization assay for hepatitis C virus neutralizing antibodies.

Not available

S-EPMC1852297 | biostudies-literature

Sequencing assays for failed genotyping with the versant hepatitis C virus genotype assay (LiPA), version 2.0.

Not available

S-EPMC3754683 | biostudies-literature

C and N stable isotopes enlighten the trophic behaviour of the dugong (Dugong dugon).

Not available

S-EPMC10776846 | biostudies-literature

Dingar_in_vivo-BioID_P103_VS6

This submission is the mass spectrometry dataset for the manuscript by Dingar et al. (In vivo BioID identifies CHD8 as a novel c-Myc interacting protein). See the README file within "Methods and Protocols" for the accompanying File descriptions.

2014-01-03 | MSV000078518 | MassIVE

Systematic review of the pharmacological treatment of alcohol use disorders in individuals infected with hepatitis C.

Not available

S-EPMC4636805 | biostudies-literature

Hematology reference intervals for adult cows in France using the Sysmex XT-2000iV analyzer.

Not available

S-EPMC6505781 | biostudies-literature

(2R,3aR,4S,7R,7aS,9R,10aR,11S,14R,14aS)-rel-3a,4,7,7a,10a,11,14,14a-Octa-hydro-4,14:7,11-diep-oxy-2,9-propanona-phtho[1,2-f:5,6-f']diisoindole-1,3,8,10-tetrone (9CI): a cyclo-phane derived from naphtho[1,2-c:5,6-c]difuran.

Not available

S-EPMC2960623 | biostudies-literature

Expression profiling in dopaminergic brain structures of rats self-administering cocaine

Gene expression profiling in dopaminergic brain structures of rats self-administering cocaine. Effect of histone deacetylase inhibition We have shown that injection of the HDAC inhibitor trichostatin A (TsA) to rats is sufficient to decrease their motivation to self-administer cocaine. The aim of th...

ORGANISM(S): Rattus norvegicus

2010-01-21 | E-GEOD-18055 | biostudies-arrayexpress

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491 Results

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Organisms

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CHEBI ID

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