Thomas Ann A - OmicsDI

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Unknown (1275)
Genomics (39)
Transcriptomics (24)
Genomic (7)
Proteomics (7)
Metabolomics (3)

Organisms

Homo sapiens (58)
Mus musculus (5)
Paracoccidioides brasiliensis (1)
Ovis aries (1)
Saccharomyces cerevisiae (1)

Repository

EGA (38)
biostudies-arrayexpress (25)
dbGaP (7)
pride (6)
MetaboLights (2)
GNPS (1)
MassIVE (1)

Tissue

Skin (3)
Fibroblast (2)
Cell culture (1)
Epithelial cell (1)
Lung (1)
Monocyte (1)

Disease

Diffuse pulmonary fibrosis (1)
Esophageal adenosquamous carcinoma (1)
Systemic scleroderma (1)

Technology Type

Mass Spectrometry (6)
Bottom-up proteomics (5)
Mass spectrometry (2)
Data-independent acquisition (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina CytoSNP, Illumina HumanOmni2.5, ILLUMINA, Illumina 450k, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2500 (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Shotgun proteomics (1)

Instrument Platform

Q Exactive Plus (1)
Q Exactive HF (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
MicrOTOF-Q II ESI-Qq-TOF (Bruker) (1)

Publication Date

2012 (6)
2014 (5)
2011 (3)
2010 (3)
2026 (3)
2009 (2)
2008 (2)
2023 (2)
2019 (2)
2025 (2)
2016 (1)
2015 (1)
2013 (1)
2007 (1)
2024 (1)

CHEBI ID

CHEBI:15756 (2)
CHEBI:17154 (2)
CHEBI:17351 (2)
CHEBI:134287 (1)
CHEBI:135063 (1)
CHEBI:14314 (1)
CHEBI:144907 (1)
CHEBI:15354 (1)
CHEBI:15355 (1)
CHEBI:15414 (1)
CHEBI:15422 (1)
CHEBI:15428 (1)
CHEBI:15611 (1)
CHEBI:15682 (1)
CHEBI:15741 (1)
CHEBI:15760 (1)
CHEBI:15891 (1)
CHEBI:15919 (1)
CHEBI:15940 (1)
CHEBI:16000 (1)
CHEBI:16010 (1)
CHEBI:16027 (1)
CHEBI:16119 (1)
CHEBI:16196 (1)
CHEBI:16199 (1)
CHEBI:16235 (1)
CHEBI:16265 (1)
CHEBI:16335 (1)
CHEBI:16356 (1)
CHEBI:16414 (1)

Metabolite Name

(E)-Ferulic acid (1)
(E)-p-coumaric acid, 4-Hydroxycinnamic acid (1)
1-Monolinolein (1)
2-hydroxypropanoic acid (1)
3',5'-cyclic GMP (1)
3-Hydroxytyramine, dopamine (1)
3-hydroxybutyric acid (1)
5,6-dihydrothymine (1)
5-oxoproline (1)
7,9-dihydro-1H-purine-2,6,8(3H)-trione (1)
9H-xanthine (1)
Amino acids | L-Tryptophan (1)
Amino acids | L-Tyrosine Adduct; Dimer + Na (1)
Anthocyanins | Kaempferol (1)
Dihomomethionine (1)
Esculetin (1)
Esculin (1)
Fraxetin, 7,8-Dihydroxy-6-methoxycoumarin (1)
Gallic acid, 3,4,5-Trihydroxybenzoic acid (1)
H-Val-Leu-OH, Valyl-Leucine (1)
L-Asparagine (1)
L-Aspartic acid, dimer (1)
L-Tyrosine, -NH2 (1)
L-Valine (1)
L-methionine (1)
Mevalonic acid, adduct (1)
N-acetyl-L-aspartic acid (1)
Nicotinamide, Niacinamide (1)
Nucleosides, nucleotides, and analogues | 3-Hydroxytyramine, dopamine; in-source Fragment (1)
O-butanoylcarnitine (1)

Study type

Transcription profiling by array (19)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2022 (146)
2021 (141)
2023 (113)
2025 (110)
2024 (110)
2020 (110)
2019 (86)
2018 (82)
2015 (71)
2017 (71)
2016 (59)
2014 (48)
2012 (33)
2013 (27)
2011 (21)
2010 (18)
2009 (18)
2026 (16)
2008 (9)
2007 (3)
2006 (2)
2003 (2)
2005 (1)
2004 (1)
2001 (1)
2000 (1)

Lab affiliation

Translational Matrix Biology, University of Cologne, Faculty of Medicine; Joseph-Stelzmann Str. 52, 50931 Cologne, Germany (2)
Center of Allergy and Environment (ZAUM), Technical University of Munich and Helmholtz Center Munich, 80802 Munich, Germany Department of Immunobiology, Université de Lausanne, 1066 Epalinges, Switzerland (1)
Departments of Radiation Oncology, The University of Michigan Medical School, Ann Arbor, Michigan 48109. (1)
Translational Matrix Biology, University of Cologne, Cologne, Germany Cologne Excellence Cluster on Cellular Stress Responses in Ageing-Associated Diseases (CECAD), University of Cologne, Cologne, Germany Center for Molecular Medicine (CMMC), University of Cologne, Cologne, Germany (1)
University of Michigan Medical Center Department of Internal Medicine, Division of Pulmonary and Critical Care Medicine 1150 West Medical Center Drive 6301 MSRB III Ann Arbor, MI 48109-5642 (1)

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Controlled Antibiotic Release From Emulsion-Loaded Alginate and Fibrin Hydrogels Using Ultrasound.

Not available

S-EPMC13636844 | biostudies-literature

A helminth enzyme subverts macrophage-mediated immunity by epigenetic targeting of prostaglandin synthesis to promote parasite chronicity

The molecular mechanisms by which worm parasites evade host immunity are incompletely understood. In a mouse model of chronic intestinal helminth infection, we identify helminthic glutamate dehydrogenase (heGDH) as an essential factor for parasite chronicity by using antibody mediated neutralization...

ORGANISM(S): Homo sapiens (Human)

2025-08-12 | PXD044102 | Pride

A helminth enzyme subverts macrophage-mediated immunity by epigenetic targeting of prostaglandin synthesis to promote parasite chronicity

Sustained retrotransposition is mediated by nucleotide deletions and interelement recombinations.

Not available

S-EPMC2563092 | biostudies-literature

Implementation of a model of bodily fluids regulation.

Not available

S-EPMC4531145 | biostudies-literature

Prenatal Polysubstance Use and Attention-Deficit/Hyperactivity Disorder (ADHD).

Not available

S-EPMC10922843 | biostudies-literature

Ocular adnexal lymphoma: A single-institution retrospective study.

Not available

S-EPMC9116088 | biostudies-literature

SWOG S0809: A Phase II Intergroup Trial of Adjuvant Capecitabine and Gemcitabine Followed by Radiotherapy and Concurrent Capecitabine in Extrahepatic Cholangiocarcinoma and Gallbladder Carcinoma.

Not available

S-EPMC4534524 | biostudies-literature

Mechanisms of endothelial cell attachment, proliferation, and differentiation on 4 types of platinum-based endovascular coils.

Not available

S-EPMC4427900 | biostudies-literature

Human thyroid adenomas, carcinomas, and normals

Human samples of various thyroid carcinomas, adenomas, and normals, each from a different patient, had mRNA assays performed using Affymetrix HG_U133A arrays, with 22283 probe-sets. The 99 samples consisted of 4 normals, 10 follicular adenomas, 13 follicular carcinomas, 7 oncocytic adenomas, 8 onco...

ORGANISM(S): Homo sapiens

2011-02-09 | E-GEOD-27155 | biostudies-arrayexpress

Insights on the regulation of the MLL/SET1 family histone methyltransferases.

Not available

S-EPMC7236755 | biostudies-literature

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