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MetabolomicsUntargeted extraction of metabolites 13C labeling profiles from time course labeling switch experiment
Dynamic isotope labeling data provide crucial information about the operation of metabolic pathways, and are commonly generated via liquid chromatography mass spectrometry (LC-MS). Metabolome-wide analysis is challenging as it requires grouping of metabolite features over different samples. We devel...
2015-10-19 | MTBLS229 | MetaboLights
MetabolomicsUntargeted extraction of metabolites 13C labeling profiles from time course labeling switch experiment
Dynamic isotope labeling data provide crucial information about the operation of metabolic pathways, and are commonly generated via liquid chromatography mass spectrometry (LC-MS). Metabolome-wide analysis is challenging as it requires grouping of metabolite features over different samples. We devel...
2015-10-19 | MTBLS228 | MetaboLights
MetabolomicsMetabolomics profiling (GC-MS and LC-MS) for time-course differentiation of pre-B cells-like (B3 cell line) under the controlled induction of the transcription factor Ikaros (STATegra Project)
The main goal of the project is to develop a new generation of bioinformatics resources for the integrative analysis of multiple types of 'omics data. These resources include both novel statistical methodologies as well as user-friendly software implementations. STATegra methods address many aspects...
2016-12-15 | MTBLS283 | MetaboLights
GenomicsNASH time course
NASH time course
PRJNA1010345 | ENA
MetabolomicsReactive Oxygen Species Deficiency Due to Ncf1-Mutation Leads to Development of Adenocarcinoma and Metabolomic and Lipidomic Remodeling in a New Mouse Model of Dextran Sulfate Sodium-Induced Colitis
Inflammatory bowel disease is characterized by chronic relapsing idiopathic inflammation of the gastrointestinal tract and persistent inflammation. Studies focusing on the immune-regulatory function of reactive oxygen species (ROS) are still largely missing. In this study, we analyzed an ROS-deficie...
2019-05-22 | MTBLS593 | MetaboLights
TranscriptomicsAging Time course
RNA was isolated from age-synchronous cultures of hermaphrodite worms grown at 25?C at 2, 5, 8, or 11 days of adulthood. We observed no deaths in the worm population at days 2 and 5 of adulthood, 30% at day 8 and 93% death at day 11. The aging time course was repeated four times. Groups of assays t...
ORGANISM(S): Caenorhabditis elegans 
2008-07-29 | E-GEOD-12168 | biostudies-arrayexpress
ProteomicsQuantitative analysis of proteome dynamics in a long-term asthma mouse model
Asthma bronchiale is an inflammatory disease of the respiratory airways and a major factor of increasing health care costs worldwide. The molecular actors leading to asthma are not fully understood and require further investigation. The aim of this study was to monitor the proteome during asthma dev...
ORGANISM(S): Mus musculus (Mouse) 
2021-02-11 | PXD011159 | Pride
Mouse model Asthma bronchiale Time-course model Ovalbumin model 
GenomicsA time-course transcriptome analysis of a double challenge bleomycin-induced lung fibrosis rat model
A time-course transcriptome analysis of a double challenge bleomycin-induced lung fibrosis rat model
PRJNA874089 | ENA
TranscriptomicsBradyrhizobium japonicum_Bacteroids Time Course
A time-course transcriptomic analysis of bacteroids isolated from soybean plants inoculated with B. japonicum USDA 110, relative to cells cultured in HM-arabinose medium was performed to characterize senescence genes. Four independent biological materials for bacteroids and free-living cells at 6 ti...
ORGANISM(S): Bradyrhizobium diazoefficiens USDA 110 
2014-11-01 | E-GEOD-60465 | biostudies-arrayexpress
Transcriptomics14028 cheY mutant time course expression on plate
time course of transcriptional profile of Typhimurium 14028 wt versus 14028 cheY mutant on agar plate
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
2010-06-09 | E-GEOD-2340 | biostudies-arrayexpress
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