Sort   by:  
 Page size 
ProteomicsIdentification of proteins surrounding paraspeckles using the Split-TurboID-dCas13 system
Interactome analysis around the NEAT1-NONO complex in paraspeckles using the Split-TurboID-dCas13 system
ORGANISM(S): Homo sapiens (Human) 
2026-10-16 | PXD066895 | Pride
Neat1 Nono Paraspeckle Rna-protein interaction 
TranscriptomicsTranscription profiling of wild type and talA talB double knock out E. coli
Wild-type and talA talB double knockout cells were grown in 50 ml of MOPS medium supplemented with 0.2% glucose or xylose in 500 ml Erlenmeyer flasks until the OD600 reached 1. At the sampling RNA was stabilized by mixing with RNAprotect Bacteria regent (Qiagen) and total RNA were isolated, by RNeas...
ORGANISM(S): Escherichia coli 
2009-06-01 | E-MEXP-1841 | biostudies-arrayexpress
ProteomicsRice (Oryza sativa) proteome
Here, we present OryzaPG-DB, a rice proteome database based on shotgun proteogenomics, which incorporates the genomic features of experimental shotgun proteomics data. This version of the database was created from the results of 27 nanoLC-MS/MS runs on a hybrid ion trap-orbitrap mass spectrometer, w...
ORGANISM(S): Oryza Sativa 
2016-07-20 | PXD004603 | JPOST Repository
ProteomicsMass Spectrometry-compatible Subcellular Fractionation
We developed a mass spectrometry-compatible subcellular fractionation protocol. This method involves separating cells into cytoplasmic, organellar, and nuclear fractions without ultracentrifugation.
ORGANISM(S): Homo Sapiens (human) 
2019-11-15 | PXD013581 | JPOST Repository
ProteomicsOne-dimensional capillary liquid chromatographic separation coupled with tandem mass spectrometry unveils the Escherichia coli proteome on a microarray scale.
We successfully identified the proteome expressed in Escherichia coli (E. coli) cells on a microarray scale using one-dimensional capillary liquid chromatography-tandem mass spectrometry (LC-MS/MS) with a 350 cm long, 100 microm i. d., monolithic silica-C(18) capillary column. E. coli tryptic digest...
ORGANISM(S): Escherichia Coli 
2016-07-20 | PXD004605 | JPOST Repository
ProteomicsBioinertization of nanoLC/MS/MS systems by depleting metal ions from the mobile phases for phosphoproteomics
We have successfully bioinertized a nanoLC/MS/MS system for the highly sensitive analysis of phosphopeptides by depleting metal ions from the mobile phase. We found that not only the direct contact of phosphopeptides with metal materials, but also the indirect contact with HPLC pump through the mobi...
ORGANISM(S): Homo Sapiens (human) 
2023-03-24 | PXD034942 | JPOST Repository
Sort   by:  
 Page size