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ProteomicsMembrane proteomic analysis of colorectal cancer tissue
We performed shotgun proteomics of colorectal cancer tissue and premalignant lesions using iTRAQ to identify biomarker candidate proteins for colorectal cancer.
ORGANISM(S): Homo sapiens (Human) 
2014-04-02 | PXD000851 | Pride
Human Membrane protein Colorectal cancer 
ProteomicsOptimization of Phosphotyrosine Proteomics
We optimized a procedure of phosphotyrosine enrichment with immunoprecipitation. Then the optimized procedure was applied into a global analysis of phosphotyrosine status in culture cells treated with Erlotinib.
ORGANISM(S): Homo Sapiens (human) 
2017-09-29 | PXD005061 | JPOST Repository
ProteomicspY-IP of Colorectal cancer cells
Phosphotyrosine status were compared between colorectal cancer cells which is sensitive or resistant to Cetuximab. Activated kinases in resistant cells were examined as targets to overcome the resistance.
ORGANISM(S): Homo Sapiens (human) 
2017-10-08 | PXD005839 | JPOST Repository
ProteomicsProteomic and phosphoproteomic data of colorectal cancer tissues and cells for Chromosome-Centric Human Proteome Project
Protein extraction and proteolytic digestion were performed using a Filter-Assisted Sample Preparation (FASP) protocol. In case of phosphopeptide enrichment immobilized Fe(III) affinity chromatography (Fe-IMAC) was performed. The peptides were fractionated using an HPLC system fitted with an SCX col...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-03-15 | MSV000079583 | MassIVE
ProteomicsPhosphoproteomics of endoscopic biopsy
Phosphoproteomics were obtained from endoscopic biopsy of gastric cancer.
ORGANISM(S): Homo Sapiens (human) 
2019-12-02 | PXD012251 | JPOST Repository
ProteomicsPhosphoproteomics of endoscopic biopsy (2nd)
Phosphoproteomics were obtained from endoscopic biopsy of gastric cancer.
ORGANISM(S): Homo Sapiens (human) 
2024-10-03 | PXD053991 | JPOST Repository
ProteomicsHela-S3 ATPome
ATP binding proteins (ATPome) dataset and ATPome-wide selectivity profiling of staurosporine and (s)-crizotinib
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-23 | MSV000080281 | MassIVE
OtherProteome-Wide Discovery of Unknown ATP-Binding Proteins and Kinase Inhibitor Target Proteins Using an ATP Probe.
Data from ProteomeXchange, PXD ID: PXD001200. File: 1300809_AAS2set_10uM.mzml. Data publsihed as part of J Proteome Res. 2014 Sep 30 . From the Abstract: {{i}} ATP-binding proteins, including protein kinases, play essential roles in many biological and pathological processes and thus these proteins...
ORGANISM(S): Homo_sapiens_viruses, Human_female 
GPM32310004771 | GPMDB
Resource Reanalysis 
OtherDiscovery of colorectal cancer biomarker candidates by membrane proteomic analysisand subsequent verification using selected reaction monitoring and tissue microarrayanalysis
Data from ProteomeXchange, PXD ID: PXD000851. File: iTRAQ3.msf.mgf. Published as part of Mol Cell Proteomics. 2014 Mar 31 . From the Abstract: {{i}} We here performed a quantitative proteomic analysis of membrane fractions from colorectal cancer tissue to discover biomarker candidates, and then ext...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM11210027051 | GPMDB
Resource Reanalysis 
ProteomicsPhosphotyrosine proteomics of MDCK cell
MDCK cell with Src-overexpression (wild type or mutant) were trypsinized, and enriched with Fe-IMAC. After labelling with TMT 10plex reagent, phosphotyrosine peptides were further enriched with phosphotyrosine antibodies. The enriched peptides were analyzed with Q Exactive Plus.
ORGANISM(S): Homo Sapiens (human) 
2023-03-31 | PXD032878 | JPOST Repository
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