Tong Pan P - OmicsDI

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Unknown (794)
Proteomics (24)
Transcriptomics (8)
Genomics (7)
Metabolomics (6)

Organisms

Homo sapiens (20)
Mus musculus (7)
Brassica oleracea (1)
Ophiocordyceps sinensis (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Artemisia annua (1)
Daucus carota subsp. sativus (1)
Leporidae (1)
Rattus norvegicus (1)
Sanghuangporus (1)

Organisms

Porphyromonas gingivalis SJD12 (1)
Porphyromonas gingivalis SJD11 (1)
Porphyromonas gingivalis SJD2 (1)
Porphyromonas gingivalis SJD5 (1)
Porphyromonas gingivalis SJD4 (1)

Repository

iProX (13)
biostudies-arrayexpress (10)
pride (10)
MetaboLights (6)
ENA (5)
jPOST (1)

Tissue

Blood serum (1)
Brain (1)
Cochlea (1)
Flower bud (1)
Heart (1)
Leaf (1)
Macrophage (1)
Neuron (1)
Plant cell (1)
Seed (1)
Seminal plasma (1)
Tendon (1)

Disease

Acute myocardial infarction (1)
Brain disease (1)
Gastric body carcinoma (1)
Malaria (1)

Technology Type

Mass Spectrometry (10)
Mass spectrometry (4)
Shotgun proteomics (4)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
Bottom-up proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina NovaSeq 6000 (2)
HiSeq X Ten (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2025 (8)
2026 (6)
2024 (6)
2021 (4)
2015 (3)
2023 (3)
2022 (3)
2020 (3)
2014 (2)
2013 (1)
2006 (1)

CHEBI ID

CHEBI:15756 (2)
CHEBI:15830 (2)
CHEBI:15882 (2)
CHEBI:15971 (2)
CHEBI:16015 (2)
CHEBI:16704 (2)
CHEBI:16828 (2)
CHEBI:16857 (2)
CHEBI:16870 (2)
CHEBI:28718 (2)
CHEBI:30769 (2)
CHEBI:30805 (2)
CHEBI:30887 (2)
CHEBI:41865 (2)
CHEBI:48131 (2)
CHEBI:55328 (2)
CHEBI:10075 (1)
CHEBI:10110 (1)
CHEBI:102265 (1)
CHEBI:10275 (1)
CHEBI:1060 (1)
CHEBI:10782 (1)
CHEBI:110187 (1)
CHEBI:11041 (1)
CHEBI:1148 (1)
CHEBI:116314 (1)
CHEBI:13172 (1)
CHEBI:131744 (1)
CHEBI:131762 (1)
CHEBI:131924 (1)

Metabolite Name

L-Tryptophan (4)
1-Methyladenosine (3)
Azelaic Acid (3)
Deoxyuridine (3)
Dodecylbenzenesulfonic Acid (3)
Guanosine (3)
Isocitric Acid (3)
L-Glutamic Acid (3)
Malic Acid (3)
Manglupenone (3)
Osmundalactone (3)
Picrocrocin (3)
Pseudouridine (3)
Taurine (3)
Zedoarol (3)
(R)-2-Hydroxystearic Acid (2)
(S)-Homostachydrine (2)
1-Methoxy-4-(2-propenyl)benzene (2)
10-Hydroxycamptothecin (2)
12S-HHT (2)
2(3H)-Benzothiazolethione (2)
2-Hydroxycinnamic Acid (2)
2-Hydroxypyridine (2)
2-Mercaptobenzothiazole (2)
2-Methylglutaric Acid (2)
21-Deoxycortisone (2)
25-Acetylvulgaroside (2)
3-Hydroxybenzoic Acid (2)
3-Hydroxybutyrylcarnitine (2)
3-Hydroxysebacic Acid (2)

First Public Date

2014 (3)
2013 (2)

Classification

bacteria (5)

Study type

Transcription profiling by array (3)
ChIP-seq (2)
RNA-seq of coding RNA (2)
Human - High-throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
Single nucleus RNA sequencing (1)

Release Date

2025 (133)
2023 (129)
2022 (113)
2024 (112)
2021 (83)
2020 (52)
2019 (38)
2026 (25)
2018 (23)
2017 (21)
2015 (20)
2014 (17)
2016 (15)
2013 (14)
2012 (4)
2010 (2)
2006 (1)
2011 (1)
2005 (1)

Lab affiliation

1 Department of Clinical Nutrition, Shanghai Children's Medical Center, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China 2 Clinical Research Center, Shanghai Children's Medical Center, School of Medicine, Shanghai Jiao Tong University, Shanghai, 200127, China (1)
1State Key Laboratory of Digital Medical Engineering, Department of Otolaryngology Head and Neck Surgery, Zhongda Hospital, School of Life Sciences and Technology, School of Medicine, Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University, Nanjing 210096, China.2 Co-Innovation Center of Neuroregeneration, Nantong University, Nantong 226001, China. (1)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (1)
Institute of Reproductive Health, Tong Ji Medical College, Hua Zhong University of Science and Technology, Wuhan, China. (1)
Joint International Research Laboratory of Metabolic & Developmental Sciences, Key Laboratory of Urban Agriculture (South) Ministry of Agriculture, Plant Biotechnology Research Center, Fudan-SJTU-Nottingham Plant Biotechnology R&D Center, School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, P. R. China (1)
Peking University Third Hospital (1)
Qingdao Agricultural University (1)
Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China (1)
School of Agriculture & Biology, Shanghai Jiao Tong University (1)
State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100037, China (1)

Tags

pathogen:bacterium (5)
pathogen (5)

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Wen-Shen-Tong-Luo-Zhi-Tong Decoction regulates bone-fat balance in osteoporosis by adipocyte-derived exosomes.

Not available

S-EPMC10071966 | biostudies-literature

Lactylation omics of rabbit rotator cuff tears

In this study, we conducted lactylation omics on rabbit rotator cuff tear samples and identified 2624 modification sites on 851 proteins. We obtained results on modification intensity, subcellular localization, modified sites, differentially modified proteins and functional pathway enrichment. Basin...

ORGANISM(S): Leporidae

2026-04-06 | PXD062718 | Pride

Proteomic Profiling of Serum Exosomes from Patients with Metastatic Gastric Cancer

Clinical management of metastatic gastric cancer (mGC) remains a major challenge due to a lack of specific biomarkers and effective therapeutic targets. Recently, accumulating evidence has suggested that exosomes play an essential role in cancer metastasis and can be an excellent reservoir of novel ...

ORGANISM(S): Homo sapiens (Human)

2020-06-29 | PXD019387 | Pride

Metastatic gastric cancer serum exosomes lc-ms/ms

Needle Adjustment Free (NAF) running suture technique (PAN suture) in laparoscopic partial nephrectomy.

Not available

S-EPMC7937216 | biostudies-literature

Unveiling the unique role of TSPAN7 across tumors: a pan-cancer study incorporating retrospective clinical research and bioinformatic analysis.

Not available

S-EPMC11340126 | biostudies-literature

Lymphocyte activation gene 3 served as a potential prognostic and immunological biomarker across various cancer types: a clinical and pan-cancer analysis.

Not available

S-EPMC11450455 | biostudies-literature