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TranscriptomicsExpression data in Arabidopsis fry1-6, xrn2-4, xrn3-3 and xrn4-6 mutants.
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome in Arabidopsis fry1-6, xrn2-4, xrn3-3 and xrn4-6 mutants. The total RNA was prepared from 15-day-old Arabidopsis plants grown on the agar plates and used for the microarray hybridization. Three replicative hybridizati...
ORGANISM(S): Arabidopsis thaliana 
2012-05-02 | E-GEOD-32977 | biostudies-arrayexpress
TranscriptomicsExpression data for drought-, cold, high-salinity and ABA treatment in Arabidopsis plants
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome under drought, cold, high-salinity and ABA treatment conditions and idenfied many stress- or ABA- responsive putative functional RNAs and fully-overlapping sense-antisense transcripts in Arabidopsis genome. Keywords: st...
ORGANISM(S): Arabidopsis thaliana 
2008-11-19 | E-GEOD-9646 | biostudies-arrayexpress
TranscriptomicsExpression data for the mom1-2 mutant of Arabidopsis
Heterochromatin is an inert region in the genome and composed of mainly remnants of transposons and repetitive elements. In Arabidopsis, the major heterchromatin regions are present at around centromeres (pericentromeric regions) and at a region on the short arm of chromosome 4 (heterochromatin knob...
ORGANISM(S): Arabidopsis thaliana 
2010-09-26 | E-GEOD-13092 | biostudies-arrayexpress
TranscriptomicsExpression data in Arabidopsis aba2-1 mutant, cyp707a1-1a2-1a3-1 triple mutant seeds, embryo and endosperm tissues
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome in aba2-1, cyp707a1-1a2-1a3-1 triple mutants seeds, embryo and endosperm tissues Freshly harvested seeds were imbibed in 8.5 cm Petri dishes containing two filter papers (approximately 7 cm diameter) and 2 mL of water a...
ORGANISM(S): Arabidopsis thaliana 
2010-04-15 | E-GEOD-15700 | biostudies-arrayexpress
TranscriptomicsExpression data in Arabidopsis axe1-5 and met1-3 mutants.
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome in Arabidopsis axe1-5 and met1-3 mutants. Fifteen-day-old Arabidopsis plants grown on the agar plates were harvested. The total RNA was prepared from 15-day-old Arabidopsis plants (axe1-5 (hda6 mutant), DR5 (parental li...
ORGANISM(S): Arabidopsis thaliana 
2011-05-15 | E-GEOD-23950 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of annotated coding genes and sORF in 16 organs and 17 environmental conditions at A. thaliana
There are 16 organ samples (dry seeds, 24H imbibed seeds, 48H imbibed seeds, juvenile rosette, adult rosette, senescence leaves, cauline leaves, stems, young buds, mature flower buds, flowers, young siliques, mature siliques and old siliques) with triplicates. There are 17 samples of different envir...
ORGANISM(S): Arabidopsis thaliana 
2012-09-30 | E-GEOD-34188 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis in ESET+/+ and ESET-/- thymocytes
Analysis of ESET deficient thymocytes at gene expression level. Each thymocyte developmental stage (preselected DP, postselected DP and CD4SP) was analysed. Total RNA obtained from isolated subpopulations of thymocytes from ESET+/+ and ESET-/- mice were analysed.
ORGANISM(S): Mus musculus 
2016-07-03 | E-GEOD-73951 | biostudies-arrayexpress
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