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MetabolomicsHarnessing microbial-derived metabolites in the urinary tract to prevent infection induced catheter encrustation

Proteus mirabilis is a predominant cause of catheter associated urinary tract infection (CAUTI), and a key virulence factor is its urease enzyme which hydrolyzes urea to ammonia. This process results in the formation of urinary stones, facilitating catheter blockage and bacteremia. The o...

2025-08-29 | MTBLS891 | MetaboLights
MetabolomicsEffects of Giardia intestinalis on mice GI tract
Not available
ORGANISM(S): Mus musculus 
ST000332 | MetabolomicsWorkbench
MetabolomicsMetabolomic profiles along the gastrointestinal tract of the healthy dog
Not available
ORGANISM(S): Canis lupus familiaris 
ST000495 | MetabolomicsWorkbench
MetabolomicsEffects of Zinc on GI tract metabolites (Part 2: Prostate)
Not available
ORGANISM(S): Mus musculus 
ST000331 | MetabolomicsWorkbench
MetabolomicsEffects of Zinc on GI tract metabolites (Part 1: Esophagus)
Not available
ORGANISM(S): Mus musculus 
ST000330 | MetabolomicsWorkbench
MetabolomicsPrimary metabolites at different points along dog gastrointestinal tract (CSH chromatography)
Not available
ORGANISM(S): Canis lupus familiaris 
ST000328 | MetabolomicsWorkbench
MetabolomicsPrimary metabolites at different points along dog gastrointestinal tract (HILIC chromatography)
Not available
ORGANISM(S): Canis lupus familiaris 
ST000327 | MetabolomicsWorkbench
ProteomicsCharacterization of Early-Phase Neutrophil Extracellular Traps in Urinary Tract Infections
Neutrophils have an important role in rapid antimicrobial defenses against and resolution of urinary tract infections (UTIs). We show that a mechanism known as neutrophil extracellular trap (NET) formation is a strategy to combat pathogens in the urinary tract. Viscous aggregates that were present i...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-31 | MSV000080847 | MassIVE
TranscriptomicsRunx1 is a tumor suppressor gene in the mouse gastrointestinal tract
The Runx1 transcription factor plays an important role in tissue homeostasis through its effects on stem/progenitor cell populations and differentiation. The effect of Runx1 on epithelial differentiation of the secretory cell lineage of the colon was recently demonstrated. This study aimed to examin...
ORGANISM(S): Mus musculus 
2012-09-13 | E-GEOD-34292 | biostudies-arrayexpress
TranscriptomicsExpression of C. albicans genes during GI tract colonization and influence of efg1, efh1 and cph1 mutations
The goals of this study were to identify the Efg1p-regulon during GI tract colonization and to compare C. albicans gene expression during colonization of different organs of the GI tract. Our results identified significant differences in gene expression between cells colonizing the cecum and ileum. ...
ORGANISM(S): Candida albicans 
2013-02-08 | E-GEOD-41771 | biostudies-arrayexpress
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