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ProteomicsA comprehensive and combined analysis of transcriptome and proteome reveals key factors of ischemia-reperfusion injury in human liver transplantation
INTRODUCTION Ischemia and reperfusion injury (IRI)-elicited tissue injury contributes to morbidity and mortality in a wide range of pathologies, including myocardial infarction, ischemic stroke, acute kidney injury, trauma, circulatory arrest 1. Ischemia-reperfusion injury is also a major challenge ...
ORGANISM(S): Homo sapiens (Human) 
2022-02-23 | PXD010812 | Pride
Ischemia reperfusion injury  transcriptome  proteome  comprehensive analysis  combined analysis  liver transplantation 
ProteomicsGlobal proteomic profiling of multiple organs of cat (Felis catus) and proteome-transcriptome correlation during acute Toxoplasma gondii infection
Understanding altered expression of proteins and transcripts associated with Toxoplasma gondii infection in cats may improve our understanding of how this parasite manipulates the molecular microenvironment of the definitive host. We performed proteomics analysis of six organs (brain, heart, spleen,...
ORGANISM(S): Felis catus (Cat) (Felis silvestris catus) 
2022-10-15 | PXD033778 | Pride
Toxoplasma gondii Toxoplasmosis Cat Correlation Proteomic profiling 
UnknownCodon usage variability determines the correlation between proteome and transcriptome fold changes.
Not available
S-EPMC3058016 | biostudies-literature
GenomicsTranscriptome and proteome correlation during APETALA1-mediated activation of flower development in Arabidopsis
Transcriptome and proteome correlation during APETALA1-mediated activation of flower development in Arabidopsis
PRJNA899823 | ENA
TranscriptomicsArabidopsisTranscriptome or Gene expression
Phosphate (Pi) deficiency impairs plant growth and productivity in many agricultural ecosystems, causing severe reductions in crop yield. To uncover novel aspects in acclimation to Pi starvation, we investigated the correlation between Pi deficiency-induced changes in transcriptome and proteome prof...
ORGANISM(S): Arabidopsis thaliana 
2012-03-12 | E-MTAB-4124 | biostudies-arrayexpress
TranscriptomicsMaternal age effect on mouse oocytes: new biological insight from proteomic analysis
The long-standing view of 'immortal germ line versus mortal soma' poses a fundamental question in biology concerning how oocytes age in molecular terms. A mainstream hypothesis is that maternal aging of oocytes has its roots in gene transcription. Investigating the proteins resulting from mRNA trans...
ORGANISM(S): Mus musculus 
2014-04-15 | E-GEOD-42959 | biostudies-arrayexpress
GenomicsTranscriptome and proteome response is uncoupled under glutamine limitation
Transcriptome and proteome response is uncoupled under glutamine limitation
PRJNA1369598 | ENA
TranscriptomicsTranscription profiling and proteomic profiling of rat colon mucosa from rats fed quercetin
Quercetin has been shown to act as an anti-carcinogen in experimental colorectal cancer (CRC). The aim of the present study was to characterise transcriptome and proteome changes occurring in the distal colon mucosa of rats supplemented with 10 g quercetin/kg diet for 11 weeks. Transcriptome data an...
ORGANISM(S): Rattus norvegicus 
2008-06-15 | E-GEOD-7479 | biostudies-arrayexpress
TranscriptomicsGlobal absolute quantification reveals tight regulation of protein expression in single Xenopus eggs
Recent developments in genomic sequencing technology have enabled comprehensive transcriptome analyses of single cells. In contrast, single cell proteomics analyses have been restricted to targeted analyses, for example using flow cytometry with GFP fusions or mass cytometry. Here, we performed glob...
ORGANISM(S): Xenopus laevis 
2014-08-04 | E-GEOD-56586 | biostudies-arrayexpress
UnknownAltered transcriptome-proteome coupling indicates aberrant proteostasis in Parkinson's disease.
Not available
S-EPMC9874017 | biostudies-literature
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