Transgenic mouse line

Show results for

Unknown (1030)
Transcriptomics (597)
Genomics (355)
Proteomics (99)
Metabolomics (10)
Methylation profiling (2)
Other (2)
Models (1)

Organisms

Mus musculus (433)
Arabidopsis thaliana (113)
Homo sapiens (64)
Rattus norvegicus (10)
Caenorhabditis elegans (6)
Zea mays (5)
Oryza sativa (4)
Danio rerio (4)
Solanum lycopersicum (3)
Drosophila melanogaster (3)
Helicobacter pylori (3)
Schizosaccharomyces pombe (2)
Pseudochlorella pringsheimii (1)
Solanum tuberosum subsp. andigenum (1)
Plasmodium yoelii (1)
Plasmodium berghei (1)
Populus tremula x Populus tremuloides (1)
Betula pendula (1)
Vitis vinifera (1)
Anopheles gambiae (1)
Populus tremula x Populus alba (1)
Oryza sativa Japonica Group (1)
Plasmodium falciparum (1)
Betapolyomavirus macacae (1)
human gammaherpesvirus 4 (1)
JC polyomavirus (1)
Betapolyomavirus hominis (1)
Human alphaherpesvirus 1 (1)
Human gammaherpesvirus 8 (1)
Murid gammaherpesvirus 4 (1)

Organisms

Mus musculus (241)
Homo sapiens (16)
Rattus norvegicus (3)
Mus (2)
Schizosaccharomyces pombe (1)
Helicobacter pylori (1)
Mus musculus domesticus (1)
Danio rerio (1)
Plasmodium falciparum (1)

Repository

biostudies-arrayexpress (501)
ENA (302)
geo (155)
pride (93)
MetaboLights (10)
jPOST (3)
MassIVE (3)
ExpressionAtlas (1)
FAIRDOMHub (1)

Tissue

Leaf (22)
Brain (20)
Plant cell (10)
Root (8)
Cell culture (8)
Seedling (7)
Shoot (4)
Heart (4)
Permanent cell line cell (4)
Skeletal muscle (3)
Cell suspension culture (3)
T cell (3)
Aorta (2)
Flower (2)
Cotyledon (2)
Hippocampal neuron (2)
Liver (2)
Gastric cancer cell line (1)
Synaptic membrane (1)
Purkinje cell (1)
Extracellular region part (1)
Hippocampal pyramidal neuron (1)
Regular cardiac myocyte (1)
Hypocotyl (1)
Neuroblastoma cell line (1)
Photoreceptor cell (1)
Cardiomyocyte cell line (1)
Neuroblastoma cell (1)
Gametophore (1)
Prostate gland (1)

Disease

Alzheimer's disease (8)
Prostate cancer (2)
Normal (2)
Breast cancer (2)
Huntington Disease (2)
Cardiovascular system disease (2)
Disease free (2)
Respiratory syncytial virus infection (1)
Ewing family tumor (1)
Not applicable (1)
Lymphoma (1)
MPIN (murine prostatic intraepithelial neoplasia) (1)
Erythroleukemia (1)
Invasive ductal carcinoma (1)
Synucleinopathy (1)
Restrictive cardiomyopathy (1)
Inflammation (1)
Frontotemporal dementia (1)
Juvenile myelomonocytic leukemia (1)
Duchenne muscular dystrophy (1)
Prostate adenocarcinoma (1)
Mixed disorder as reaction to stress (1)
Neuroblastoma (1)
Parkinson's disease (1)
Amyotrophic lateral sclerosis (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (93)
Shotgun proteomics (51)
Affinity purification coupled with mass spectrometry proteomics (27)
Bottom-up proteomics (22)
Gel-based experiment (17)
Data-dependent acquisition (13)
Mass spectrometry (7)
SWATH MS (4)
Top-down proteomics (4)
NMR spectroscopy (3)
Data-independent acquisition (3)
Affinity proteomics (2)
All-ion fragmentation (2)
Mass spectrometry assay (1)
Proteogenomics (1)
SRM/MRM (1)

Instrument Platform

NextSeq 500 (11)
Illumina HiSeq 2000 (8)
Illumina HiSeq 2500 (6)
Illumina HiSeq 4000 (5)
Illumina NovaSeq 6000 (4)
BD FACS Aria III (2)
Illumina Genome Analyzer IIx (2)
Scanning hardware (2)
Illumina HiSeq 3000 (2)
Bravo automated liquid handling robot station (Agilent) (1)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1 (1)
Illumina Nextera XT index kits (Set A–D) (1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies) (1)
Aria III (BD Biosciences) (1)
G2565BA DNA microarray scanner [Agilent Technologies] (1)
MouseWG-6_V2_0_R3_11278593_A (1)
Affymetrix GeneAtlas (1)
ViiA 7 Real-Time PCR System (Life Technologies) (1)
Scann Array Express (1)
BD Influx (1)
ScanArray 5000 [PerkinElmer] (1)
ArrayWoRx Biochip Reader [Applied Precision] (1)
Other (1)
ScanArray Express HT (1)
Illumina Genome Analyzer II (1)
Illumina MiniSeq (1)
Ion Torrent Proton (1)
NextSeq 2000 (1)
Illumina HiSeq 1000 (1)
BGISEQ-500 (1)

Publication Date

2014 (71)
2013 (59)
2012 (57)
2015 (55)
2011 (52)
2008 (52)
2010 (44)
2009 (41)
2025 (37)
2023 (33)
2016 (33)
2019 (30)
2026 (29)
2024 (26)
2018 (26)
2021 (25)
2007 (23)
2020 (19)
2017 (19)
2022 (16)
2004 (9)
2005 (6)
2006 (5)

CHEBI ID

CHEBI:16919 (4)
CHEBI:16856 (3)
CHEBI:17268 (3)
CHEBI:7916 (3)
CHEBI:15891 (3)
CHEBI:17385 (3)
CHEBI:68434 (2)
CHEBI:132966 (2)
CHEBI:17814 (2)
CHEBI:24266 (2)
CHEBI:17992 (2)
CHEBI:27997 (2)
CHEBI:16113 (2)
CHEBI:26984 (2)
CHEBI:44215 (2)
CHEBI:16450 (2)
CHEBI:18132 (2)
CHEBI:18237 (2)
CHEBI:17126 (2)
CHEBI:22660 (2)
CHEBI:18186 (2)
CHEBI:16802 (2)
CHEBI:17802 (2)
CHEBI:15676 (2)
CHEBI:17533 (2)
CHEBI:73705 (2)
CHEBI:7676 (2)
CHEBI:73514 (2)
CHEBI:16668 (2)
CHEBI:17748 (2)

Metabolite Name

Creatine (3)
Uridine (2)
Taurine (2)
Inosine (2)
Allantoin (2)
Choline (2)
Adenosine (2)
Glycine (2)
Glycerol (2)
Beta-alanine (2)
Myo-inositol (2)
Boivinide A (1)
K-Strophanthin-beta (1)
Quercetin 3-O-rhamnoside 7-O-glucoside (1)
Isovitexin 2''-O-beta-D-glucoside (1)
Cascaroside B (1)
Glucofrangulin A (1)
Aloinoside A (1)
Cascaroside C (1)
Cascaroside D (1)
Glucofrangulin B (1)
2-O-[6-O-Octanoyl-alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-D-glycerate (1)
Panogenin-3-o-alpha-L-rhamnopyranoside (1)
Aspecioside (1)
Carminomycin (1)
Soularubinone (1)
11-o-Galloylbergenin (1)
4-o-Galloylbergenin (1)
4'-O-Demethylsordarin (1)
1-(2-Hydroxy-3,4,5,6-tetramethoxyphenyl)-3-(2,3,4,6-tetramethoxyphenyl)-2-propen-1-one (1)

First Public Date

2014 (66)
2019 (31)
2024 (30)
2025 (29)
2026 (23)
2023 (21)
2021 (21)
2022 (20)
2017 (19)
2020 (11)
2018 (11)
2015 (8)
2016 (6)
2013 (6)

Classification

protozoa (1)
bacteria (1)

Study type

Transcription profiling by array (350)
RNA-seq of coding RNA (63)
ChIP-seq (28)
Methylation profiling by high throughput sequencing (8)
Unknown experiment type (6)
RNA-seq of coding RNA from single cells (6)
Comparative genomic hybridization by array (5)
ChIP-chip by tiling array (4)
RNA-seq of non coding RNA (4)
ChIP-chip by array (3)
Methylation profiling by array (3)
Animal - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
ATAC-seq (2)
Other (2)
RNA-seq of non coding RNA from single cells (1)
RIP-chip by array (1)
Plant - High-throughput sequencing (1)
Cell line - One-color microarray (1)
RNAi profiling by array (1)
Genotyping by array (1)
MicroRNA profiling by high throughput sequencing (1)
MicroRNA profiling by array (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2014 (111)
2015 (107)
2013 (99)
2020 (93)
2012 (91)
2016 (89)
2021 (87)
2011 (84)
2017 (82)
2023 (81)
2018 (75)
2010 (70)
2008 (70)
2019 (67)
2022 (63)
2025 (58)
2009 (56)
2024 (42)
2007 (34)
2004 (16)
2026 (13)
2005 (12)
2006 (10)
2003 (6)
2001 (5)
1999 (4)
2002 (3)
1998 (2)
2000 (1)

Lab affiliation

Department Biochemistry of Plant Interactions, Leibniz Institute of Plant Biochemistry, 06120 Halle (Saale), Germany (6)
Department Biochemistry of Plant Interactions, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany (4)
Proteomics platform Necker, Université Paris Cité - Structure Fédérative de Recherche Necker, INSERM US24/CNRSUAR3633, Paris 75015, France. (2)
Leibniz Institute of Plant Biochemistry, Department Biochemistry of Plant Interactions, Weinberg 3, 06120 Halle (Saale), Germany (2)
Group Leader, Quattrocolo Lab, Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway (2)
State Key Laboratory of Soil and Sustainable Agriculture (1)
1Brunason Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, Gavin Herbert Eye Institute, University of California, Irvine, Irvine, CA, 92697, USA; 2Department of Physiology and Biophysics, University of California, Irvine, Irvine, CA, 92697, USA; 3Department of Chemistry, University of California, Irvine, Irvine, CA, 92697, USA; Department of Molecular Biology and Biochemistry, University of California, Irvine, Irvine, CA, 92697, USA (1)
Department of Biochemistry&Molecular Biology, SUNY Upstate Medical University, Syracuse, NY, USA (1)
State Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macau (1)
Institute of Innate Immunity BMZ-II, Building 12, Room 2G408 University Hospital Bonn, University of Bonn (1)
Srikant Rangaraju, MD MS Associate Professor Department of Neurology Vascular Neurology Division Emory University (1)
Department of Plant Molecular Biology, University of Lausanne, Biophore Building, DBMV, CH-1015 Lausanne, Switzerland (1)
Biology Department Brookhaven National Laboratory Upton, NY 11793 (1)
BCI Mass Spectrometry Facility 10,2 &1.03 First Floor John Vane Science Centre Bars Cancer Institute, Queen Mary Charterhouse square London EC1M 6BQ (1)
University of Southern Denmark, department of biochemistry and molecular biology, Protein research group, Denmark (1)
Group leader Cell and Developmental Biology John Innes Centre Norwich Research Park Norwich, UK (1)
Leibniz Institute of Plant Genetics and Crop Plant Research (IPK) OT Gatersleben, D-06466 Seeland, Germany (1)
Laboratory of Regulatory Mechanisms in Immunity Institute of Carcinogenesis Federal State Budgetary Institution "N. N. Blokhin National Medical Research Center of Oncology" of the Ministry of Health of the Russian Federation (1)
Durham University (1)
Mannheim University of Applied Sciences Center for Mass Spectrometry and Optical Spectroscopy (CeMOS) (1)
Proteomics Unit, Navarrabiomed-proteored (Spain) (1)
Proteomics Unit, Navarrabiomed-Proteored (Pamplona-Spain) (1)
University of Melbourne, Florey Institute (1)
University of Fudan (1)
High-Throughput Biological Sciences, Department of Chembical Biology & Therapeutics, St. Jude Children's Research Hospital (1)
lab. of bioengineering, Institute of Biology and Soil Science, Far East Branch of Russian Academy of Sciences, Vladivostok-22, 690022, Russia (1)
Department of Neurobiology, Northwestern University, Evanston, IL, USA (1)
Department of Cell and Molecular Biology, University of Hawaii at Manoa, Honolulu, Hawaii 96822 (1)
Department of Neurology Associate Professor (1)
Departments of Neurology and Neuroscience Mayo Clinic, Rochester, MN, USA (1)

Previous page
1 / 210
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 210
Next page

Sort by:

Relevance

Page size

A transgenic mouse line for assaying tissue-specific changes in endoplasmic reticulum proteostasis.

Not available

S-EPMC10195735 | biostudies-literature

Pathogenic human tau in the Line 66 model of frontotemporal dementia

Transgenic human tau in subcellular fractions extracted after electrophoresis of L66 mouse brain extract. For higher sequence coverage trypsin (Tr) and thermolysin (TL) digests were analysed.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090)

2020-08-13 | MSV000085945 | MassIVE

Proteome analysis of transgenic 1D1a mice

T cells specifically recognize an antigen with a T cell receptor (TCR) consisting of α- and β-chain. The transgenic 1D1a mice were generated on the genetic background of the B10.D2(R101) line and expressed in their T cells the α-chain TCR (TCRα) specific to the allogeneic MHC molecule Н2-Kb. To eval...

ORGANISM(S): Mus musculus (Mouse)

2023-05-10 | PXD034188 | Pride

An efficient inducible RPE-Selective cre transgenic mouse line.

Not available

S-EPMC7856207 | biostudies-literature

Expression data from knock-down ES stable cell line

In order to identify the effects of the knock-down of the gene of interest on the mouse ES transcriptome, we performed Affymetrix Gene-Chip hybridization experiments for the knock-down cell line. Transcriptome analysis of the knock-down transgenic mouse ES cell line. The knock-down cell line (shE13)...

ORGANISM(S): Mus musculus

2012-12-13 | E-GEOD-31165 | biostudies-arrayexpress

Transcription profiling of HD R6/1 transgenic mouse line brain hemispheres, time series

HD R6/1 transgenic mouse line brain hemispheres dissected. RNA targets were created for transgenics and wildtypes at time points 18, 22 and 27 weeks. Profiles and data analysis performed using the Bioconductor software and linear model contrasts using LIMMA on RMA probeset summarys. Experiment Ove...

ORGANISM(S): Mus musculus

2009-04-23 | E-GEOD-3621 | biostudies-arrayexpress

Transcription profiling of mouse E12.5 telencephalon from 152F7 transgenic mouse and neuroblastoma N18 cell line tranfected with a pAd-Dyrk1a vector

This SuperSeries is composed of the following subset Series:; GSE14021: Transcriptional analysis of E12.5 telencephalon from 152F7 transgenic mouse; GSE14030: Transcriptional analysis of murine neurobastoma N18 cell line transfected with a pAd-Dyrk1a vector Experiment Overall Design: Refer to indivi...

ORGANISM(S): Mus musculus

2009-02-27 | E-GEOD-14105 | biostudies-arrayexpress

Metabolomic profiling of primary mouse proximal tubule cells (mPTCs) derived from 24-week-old CTR and Atg7 PT-KO kidneys

To explore the role of ATG7 in the kidney PT, we crossed mice homozygous for floxed alleles of Atg7 with Ggt1-Cre mice expressing Cre recombinase under the rat Ggt1 (gamma-glutamyltransferase 1) gene promoter. This generated Atg7fl/fl; γGt1cre/cre mice (hereafter referred to as Atg7 PT-KO), in which...

2026-09-30 | MTBLS15857 | MetaboLights

Molecular dissection and testing of PRSS37 function through LC-MS/MS and the generation of a PRSS37 humanized mouse model

LC-MS/MS of Prss37 WT and KO mice male reproductive tract. Title: Molecular dissection and testing of PRSS37 function through LC-MS/MS and the generation of a PRSS37 humanized mouse model Authors: Courtney Sutton1,2, Kaori Nozawa1,2, Katarzyna Kent1,2, Alexander Saltzman3, Mei Leng3, Sureshbabu Na...

ORGANISM(S): Mus Musculus (ncbitaxon:10090)

2023-04-07 | MSV000091662 | MassIVE

Sequential stage specific reporter line analysis (SSRLA) of 3 BAC transgenic mESC lines

FACS purified cells from differentiation day 14-15 cells from 3 BAC transgenic mESC lines: Hes::GFP (early), Nurr1::GFP (mid), and Pitx3::YFP (late) DA neuron development reporter lines All three lines were differentiated towards the midbrain dopamine phenotype, and FACS purification was performed ...

ORGANISM(S): Mus musculus

2012-07-11 | E-GEOD-37446 | biostudies-arrayexpress

Previous page
1 / 210
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 210
Next page

Sort by:

Relevance

Page size

2099 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets