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ProteomicsDynamic regulation of the COP9 signalosome: Insights into the spatial localization and subunit versatility of the complex
HeLa cells were fracitonated into nuclear soluble, chromatin bound and cytosolic. Extracts were immunoprecipitated with a CSN3 antibody, then eluted with glycine. Proteins were digested, then enriched for phosphopeptides. Samples were analyzed on an LTQ-Orbitrap. Data was analyzed using the TRansOMi...
ORGANISM(S): Homo sapiens (Human) 
2019-11-25 | PXD000277 | Pride
Proteomics Human Phosphoproteomics Csn 
UnknownC FTR variants are associated with chronic bronchitis in smokers.
Not available
S-EPMC9840463 | biostudies-literature
TranscriptomicsRNA-seq transcript assembly evaluation
To assess the performance of computational methods for exon identification, transcript reconstruction and expression level quantification from RNA-seq data, 24 protocol variants of 14 independent software programs (AUGUSTUS, Cufflinks, Exonerate, GSTRUCT, iReckon, mGene, mTim, NextGeneid, Oases, SLI...
ORGANISM(S): Drosophila melanogaster 
2013-07-15 | E-MTAB-1730 | biostudies-arrayexpress
UnknownBiomarkers of Key Biological Pathways in CVD.
Not available
S-EPMC5108521 | biostudies-literature
UnknownOvercoming Radiation Resistance in Gliomas by Targeting Metabolism and DNA Repair Pathways.
Not available
S-EPMC8880405 | biostudies-literature
UnknownFast, Quantitative and Variant Enabled Mapping of Peptides to Genomes.
Not available
S-EPMC5571441 | biostudies-literature
UnknownChange in fatty acid composition of plasma triglyceride caused by a 2 week comprehensive risk management for diabetes: A prospective observational study of type 2 diabetes patients with supercritical fluid chromatography/mass spectrometry-based semi-target lipidomic analysis.
Not available
S-EPMC9807157 | biostudies-literature
GenomicsRNA-seq transcript assembly evaluation
RNA-seq transcript assembly evaluation
PRJEB4208 | ENA
ProteomicsIdentification of a biomarker in cerebrospinal fluid for neuronopathic forms of Gaucher disease
Gaucher disease, a recessive inherited metabolic disorder caused by defects in the gene encoding glucosylceramidase (GlcCerase), can be divided into three subtypes according to the appearance of symptoms associated with central nervous system involvement. We now identify a protein, glycoprotein non-...
ORGANISM(S): Homo sapiens (Human) 
2016-06-24 | PXD001654 | Pride
Csf Gaucher Proteomics 
UnknownRapid detection of structural variation in a human genome using nanochannel-based genome mapping technology.
Not available
S-EPMC4322599 | biostudies-literature
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