Trichomes - OmicsDI

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Unknown (751)
Genomics (165)
Transcriptomics (70)
Proteomics (9)
Metabolomics (7)

Organisms

Arabidopsis thaliana (40)
Gossypium hirsutum (8)
Andropogon gerardi (7)
Bacteria (7)
Canis lupus familiaris (7)
Clostridium perfringens (7)
Nicotiana tabacum (5)
Solanum lycopersicum (4)
Medicago truncatula (3)
Drosophila melanogaster (3)
Gossypium tomentosum (2)
Cucumis sativus (2)
Populus tremula x Populus alba (2)
Gossypium raimondii (2)
Gossypium arboreum (2)
Populus balsamifera (1)
Chenopodium quinoa (1)
Medicago sativa (1)
Schizosaccharomyces pombe (1)
Candida albicans (1)
Limonium bicolor (1)
Solanum lycopersicum x Solanum habrochaites (1)
Gossypium (1)
Limnospira indica PCC 8005 (1)
Populus sp. (1)
Stevia rebaudiana (1)
Gossypium barbadense (1)
Prunus persica (1)
Brassica napus (1)
Cannabis sativa (1)

Organisms

Arabidopsis thaliana (18)
Solanum lycopersicum (8)
Gossypium hirsutum (4)
Nicotiana tabacum (4)
Stevia rebaudiana (3)
Cannabis sativa (3)
Drosophila melanogaster (3)
Cucumis sativus (3)
Xanthium strumarium (2)
Cistus creticus subsp. creticus (2)
Solanum pennellii (2)
Medicago truncatula (2)
Prochlorothrix hollandica PCC 9006 = CALU 1027 (1)
Petunia integrifolia (1)
Petunia exserta (1)
Leptolyngbya valderiana (1)
Salvia pomifera (1)
Leucosceptrum canum (1)
Limnospira indica PCC 8005 (1)
Oscillochloris trichoides (1)
Mentha (1)
Brassica juncea var. crispifolia (1)
Mentha x piperita (1)
Mentha spicata (1)
Limonium bicolor (1)
Solanum lycopersicum x Solanum habrochaites (1)
Tussilago farfara (1)
Erythranthe lewisii (1)
Petunia axillaris (1)
Mentha longifolia (1)

Repository

ENA (157)
biostudies-arrayexpress (42)
geo (36)
MetaboLights (7)
pride (7)
MassIVE (1)
PAXDB (1)

Tissue

Plant cell (5)
Leaf (4)
Trichome (2)

Disease

Disease free (1)

Technology Type

Mass Spectrometry (7)
Mass spectrometry (5)
Shotgun proteomics (4)
Mass spectrometry assay (2)
Bottom-up proteomics (2)
Gel-based experiment (1)

Instrument Platform

Affymetrix Gene Atlas System (1)
BAS-1800 [FUJIFILM] (1)
NextSeq 500 (1)
RP-HPLC-ESI-LTQ-Orbitrap mass analyser (1)
Liquid Chromatography MS - - - Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
TripleTOF 5600 (AB Sciex) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
TRAP-FTMS (1)

Publication Date

2009 (26)
2013 (12)
2026 (9)
2010 (7)
2022 (4)
2014 (4)
2025 (4)
2017 (3)
2015 (3)
2012 (3)
2011 (3)
2008 (3)
2016 (3)
2005 (2)
2021 (2)
2018 (2)
2019 (2)
2007 (1)
2024 (1)

UNIPROT ID/AC

14310_SOLLC (1)
14331_SOLLC (1)
14332_SOLLC (1)
14333_SOLLC (1)
14334_SOLLC (1)
14335_SOLLC (1)
14336_SOLLC (1)
14337_SOLLC (1)
14338_SOLLC (1)
14339_SOLLC (1)
4081.Solyc00g017210.1.1 (1)
4081.Solyc00g036540.1.1 (1)
4081.Solyc00g042140.1.1 (1)
4081.Solyc01g006980.2.1 (1)
4081.Solyc01g008090.2.1 (1)
4081.Solyc01g008330.2.1 (1)
4081.Solyc01g008410.1.1 (1)
4081.Solyc01g010580.2.1 (1)
4081.Solyc01g012700.2.1 (1)
4081.Solyc01g016990.1.1 (1)
4081.Solyc01g059760.1.1 (1)
4081.Solyc01g066700.2.1 (1)
4081.Solyc01g068020.2.1 (1)
4081.Solyc01g074000.2.1 (1)
4081.Solyc01g080600.2.1 (1)
4081.Solyc01g081180.1.1 (1)
4081.Solyc01g086800.2.1 (1)
4081.Solyc01g086820.2.1 (1)
4081.Solyc01g087710.2.1 (1)
4081.Solyc01g088410.2.1 (1)

CHEBI ID

CHEBI:17521 (3)
CHEBI:16840 (2)
CHEBI:16710 (2)
CHEBI:16625 (2)
CHEBI:17111 (2)
CHEBI:16578 (2)
CHEBI:17969 (2)
CHEBI:18425 (2)
CHEBI:28527 (2)
CHEBI:15531 (2)
CHEBI:16356 (2)
CHEBI:16493 (2)
CHEBI:30918 (2)
CHEBI:16192 (2)
CHEBI:18066 (2)
CHEBI:15751 (2)
CHEBI:15467 (2)
CHEBI:16584 (2)
CHEBI:15652 (2)
CHEBI:15713 (2)
CHEBI:16264 (2)
CHEBI:17659 (2)
CHEBI:15721 (2)
CHEBI:16680 (2)
CHEBI:17287 (2)
CHEBI:17202 (2)
CHEBI:17858 (2)
CHEBI:16856 (2)
CHEBI:16238 (2)
CHEBI:48153 (2)

Metabolite Name

Flavin mononucleotide (2)
3-dehydroshikimate (2)
Ascorbic acid (2)
1-deoxy-D-xylulose 5-phosphate (2)
Coenzyme A (2)
L-cystine (2)
Acetyl-CoA (2)
Dihydroxyacetone phosphate (2)
Glutathione disulfide (2)
UDP-glucose (2)
Quinic acid (2)
Glutathione (2)
L-citrulline (2)
Uridine (2)
Guanosine (2)
Cytidine (2)
CDP-choline (2)
Allantoin (2)
L-alanine (2)
Adenosine (2)
Nicotinic acid (2)
Glycine (2)
Uric acid (2)
L-threonine (2)
L-valine (2)
L-asparagine (2)
L-tryptophan (2)
L-glutamine (2)
L-proline (2)
L-histidine (2)

First Public Date

2024 (27)
2026 (23)
2014 (20)
2023 (14)
2021 (13)
2022 (12)
2015 (11)
2025 (10)
2013 (10)
2020 (5)
2019 (4)
2017 (4)
2018 (2)
2016 (2)

Modification

Not available (1)

Study type

Transcription profiling by array (37)
RNA-seq of coding RNA (4)
ChIP-seq (1)

Release Date

2022 (79)
2024 (76)
2021 (76)
2023 (68)
2025 (64)
2020 (63)
2019 (50)
2018 (44)
2016 (39)
2017 (35)
2015 (29)
2009 (29)
2013 (27)
2012 (19)
2014 (18)
2011 (17)
2010 (13)
2026 (8)
2008 (7)
2004 (6)
2002 (6)
2007 (5)
2005 (5)
2000 (3)
2006 (2)
2003 (2)
2001 (1)
1999 (1)
1997 (1)

Lab affiliation

Associate Professor, SCPS, Southern Cross University (1)
Department of Biological Chemistry John Innes Centre Norwich Research Park Norwich NR4 7UH (1)
Department of Chemistry, University of Reading, UK (1)
Leibniz Institute of Plant Biochemistry (1)
Life Science Institute (1)
Proteomics (1)
ZEA-3 Forschungszentrum Jülich Germany (1)

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Multiomics of tomato glandular trichomes reveals distinct features of central carbon metabolism supporting high productivity of specialized metabolites

Glandular trichomes are metabolic cell factories with the capacity to produce large quantities of secondary metabolites. Little is known about the connection between central carbon metabolism and metabolic productivity for secondary metabolites in glandular trichomes. To address this gap in our know...

2017-04-25 | MTBLS297 | MetaboLights

Transcription profiling of Arabidopsis trichomes from wild type, and tryptychon and glabra3 mutant plants

Expression analysis of mature Arabidopsis trichomes in Col-0 and two mutants, triptychon (try-JC) and glabra3 (gl3-3)

ORGANISM(S): Arabidopsis thaliana

2008-09-23 | E-ATMX-33 | biostudies-arrayexpress

Transcription profiling of Arabidopsis ecotype Columbia trichomes

Leaf trichomes of Columbia isolated using associated protocol.

ORGANISM(S): Arabidopsis thaliana

2009-02-03 | E-MEXP-2008 | biostudies-arrayexpress

Transcription profiling of Arabidopsis homeodomain 2 trichomes

Transcriptional profiling of isolated homeodomain 2 (hd2) trichomes

ORGANISM(S): Arabidopsis thaliana

2009-02-04 | E-MEXP-2022 | biostudies-arrayexpress

Transcription profiling of Arabidopsis gl3-sst sim trichomes

Transcriptional profiling of isolated gl3-sst sim trichomes.

ORGANISM(S): Arabidopsis thaliana

2009-02-04 | E-MEXP-2013 | biostudies-arrayexpress

Proteomics of Tomato Trichome Metabolism

Glandular trichomes (GT) are specialized cell factories that have the capacity to produce large amounts of metabolites which can amount to over 10% of the leaf dry weight. The specific expression of secondary metabolite pathways in glandular trichomes has facilitated their elucidation. However, litt...

ORGANISM(S): Solanum lycopersicum

2017-07-04 | PXD003154 | Pride