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TranscriptomicsTranscription profiling of E. coli strain MC4100 in comparison to its otherwise isogenic ycgE::cat derivative to identify YcgE dependent genes
Genome-wide transcriptional profiling on microarray was performed for strain MC4100 in comparison to its otherwise isogenic ycgE::cat derivative. Strains were grown in LB at 28°C and cells were harvested at an OD (578nm) of 4.0.
ORGANISM(S): Escherichia coli 
2009-06-03 | E-MEXP-1872 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of E. coli wild type and ycgF::kan cells treated with blue-light irradiation for 3 hours at 16oC
Wildtype and ycgF::kan cells were grown in LB medium at 37°C to an OD(578 nm) of 0,7. Then the cultures were shifted to 16°C and blue-light irradiated for 3 hours.
ORGANISM(S): Escherichia coli 
2009-06-03 | E-MEXP-1877 | biostudies-arrayexpress
GenomicsChIP-Seq of the Streptomyces venezuelae regulator BldD and its D116A mutant.
The dimerization and binding of DNA by BldD is affected by its interaction with cyclic di-GMP. The D116A mutant of BldD is partially impaired in its biding of cyclic di-GMP. ChIP-Seq was carried out to determine the difference in the degree of DNA binding by the wild type and D116A mutated BldD in S...
ORGANISM(S): Streptomyces venezuelae 
2017-11-01 | E-MTAB-5328 | biostudies-arrayexpress
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