Tubule formation

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Transcriptomics (760)
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Homo sapiens (183)
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Metabolite Name

Isorhamnetin (2)
N-butyronitrile (1)
1-palmitoyl-2-vernoloyl-phosphatidylcholine (1)
4-demethyl-7-(3-amino-3-carboxypropyl)wyosine (1)
M276T310 (1)
1-Amino-2-pyrrolidinecarboxylic acid (1)
M358T253 (1)
Guadinomic acid (1)
Butyramide (1)
Icosa-5,8,10,12,14-pentaenoylcarnitine (1)
M228T181 (1)
M331T268 (1)
Methylmalonylcarnitine [M] (1)
12-Methyldocosanoylcarnitine (1)
Hexacos-17-enoylcarnitine (1)
Crocin IV (1)
4-Amino-N-(2,4-difluorophenyl)benzenesulfonamide (1)
3-(4-Hydroxy-5,7-dimethyl-3-methylene-2-oxo-3,3a,4,5,8,8a-hexahydro-2H-cyclohepta[b]furan-6-yl)propyl acetate (1)
3-(Diphenylphosphino)propionic acid (1)
6-[Hydroxy(phenyl)methyl]-1-[2-(3-methylbutanoylamino)ethyl]-4-oxopyridine-3-carboxylic acid (1)
3-O-trans-Feruloyleuscaphic_acid (1)
Ethyl 4-(3-benzoyl-2-thioureido)benzoate (1)
N-(3-Chlorophenyl)-N'-(2-pyridinyl)thiourea (1)
Piperolein_B (1)
Calycosin (1)
3-Ethyl-N-(3-fluorophenyl)-5-methyl-4-isoxazolecarboxamide (1)
1H-Indazole-3-carboxamide, N-[1-(aminocarbonyl)-2-methylpropyl]-1-(4-hydroxypentyl)- (1)
Danthron (1)
5,5-Dimethyl-3-(4-nitrobenzyl)-2,4-imidazolidinedione (1)
Cedrin (1)

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2014 (10)
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2020 (3)
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Study type

Transcription profiling by array (519)
RNA-seq of coding RNA (115)
ChIP-seq (16)
Transcription profiling by tiling array (12)
Comparative genomic hybridization by array (10)
ChIP-chip by tiling array (9)
ChIP-chip by array (8)
RNA-seq of coding RNA from single cells (7)
RNA-seq of total RNA (6)
RNA-seq of non coding RNA (6)
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Methylation profiling by high throughput sequencing (4)
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Cell line - One-color microarray (2)
Proteomic profiling by array (2)
PRO-seq (1)
Plant - High-throughput sequencing (1)
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RIP-seq (1)
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CUT&RUN (1)

Release Date

2010 (132)
2009 (98)
2013 (93)
2011 (90)
2012 (89)
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2014 (79)
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2008 (71)
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2007 (36)
2006 (22)
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2003 (3)
2002 (1)
2001 (1)
2000 (1)
1999 (1)

Lab affiliation

Chongqing Medical University (1)
Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences (1)
Institut Pasteur Dynamics of Host-Pathogen Interactions 25, rue du Dr. Roux 75724 Paris CEDEX 15 France (1)
State Key Laboratory of Organ Failure Research, School of Laboratory Medicine and Biotechnology, Southern Medical University (1)

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Transcription profiling of adult drosophila renal tubule vs whole fly

The experiment was designed to identify genes abundant or enriched in adult Drosophila melanogaster Malpighian (renal) tubule as compared to the whole fly.

ORGANISM(S): Drosophila melanogaster

2004-06-23 | E-MEXP-127 | biostudies-arrayexpress

ESCRT-mediated machinery directly drives cardiac T-tubule formation

PRJNA1154598 | ENA

ESCRT-mediated machinery directly drives cardiac T-tubule formation

PRJNA1153460 | ENA

2.5D tubulogenesis

Hepatocyte growth factor-induced three-dimensional tubulogenesis (3D) is a simple and highly controllable system for studying epithelial tubule initiation and maintenance. However, due to its limited efficiency and asynchronous development, isolating genes associated with specific morphological chan...

ORGANISM(S): Canis lupus familiaris

2010-12-24 | E-GEOD-25514 | biostudies-arrayexpress

ESCRT-mediated machinery directly drives cardiac T-tubule formation

Cardiac transverse tubules (T-tubules) are regular spaced plasma membrane invaginations that play an essential role in establishing excitation-contraction coupling of cardiomyocytes, yet the molecular machinery that controls T-tubule formation remains elusive. The endosomal sorting complex required ...

ORGANISM(S): Mus musculus

2026-03-03 | GSE276054 | GEO

Transcription profiling of mouse kidney from Aquaporin-11 knockout effect

Aquaporin-11 (AQP11), a new member of the aquaporin family, is localized in the endoplasmic reticulum (ER). Aqp11â€“/â€“ mice neonatally suffer from polycystic kidneys derived from the proximal tubule. Its onset is proceeded by the vacuolization of ER. However, the mechanism for the formation of ...

ORGANISM(S): Mus musculus

2008-10-26 | E-GEOD-10634 | biostudies-arrayexpress

In vivo cell biological screening identifies an endocytic capture mechanism for T-tubule formation.

Not available

S-EPMC7381618 | biostudies-literature

In vitro cyst puncture and injury-induced tubule formation using renal epithelial cells.

Not available

S-EPMC10037192 | biostudies-literature

Transcription profiling of human renal proximal tube endothelial cells at 24h and 1%oxygen

Aim of the study was to characterize the transcriptional response of human primary renal proximal tubule endothelial cells (RPTEC) to low oxygen stress. Experiment Overall Design: Passage 4 renal proximal tubule epithelial cells were exposed to a humidified atmosphere consisting of either 5% CO2 and...

ORGANISM(S): Homo sapiens

2008-10-25 | E-GEOD-12792 | biostudies-arrayexpress

Laminar shear inhibits tubule formation and migration of endothelial cells by an angiopoietin-2 dependent mechanism.

Not available

S-EPMC2699463 | biostudies-literature

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