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TranscriptomicsDevelopmental gene expression of Xenopus laevis J strain [stage]
Comprehensive RNA-seq experiments to measure the expression of homoeologs across different developmental stages, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Gra...
ORGANISM(S): Xenopus laevis 
2016-10-24 | E-GEOD-73430 | biostudies-arrayexpress
TranscriptomicsTissue gene expression of Xenopus laevis J strain [tissue]
Comprehensive RNA-seq experiments to measure the expression of homoeologs across different tissues, as a part of the Xenopus laevis genome project. This work is funded by Agency Japanese Ministry of Education, Culture, Sports, Science and Technology (MEXT; "Genome Science" Grant ID 221S000...
ORGANISM(S): Xenopus laevis 
2016-10-24 | E-GEOD-73419 | biostudies-arrayexpress
TranscriptomicsIdentification of neural genes using Xenopus DNA microarrays
In order to isolate novel genes regulating neural induction, we utilized a DNA microarray approach. As neural induction is thought to occur via the inhibition of BMP signaling, BMP signaling was inhibited in ectodermal cells by overexpression of a dominant-negative receptor. RNAs were isolated from...
ORGANISM(S): Xenopus laevis 
2010-06-10 | E-GEOD-2266 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of IBC (N=10) and nIBC (N=3) cell preclinical models
Gene expression profiles of 10 IBC preclinical models were analysed to investigate IBC cell intrinsic molecular changes as well as to evaluate to what extent IBC preclinical models recapitulate the IBC expression profile of patient samples.
ORGANISM(S): Homo sapiens 
2021-10-28 | E-MTAB-11134 | biostudies-arrayexpress
TranscriptomicsA Xenopus DNA microarray approach to identify novel direct BMP target genes involved in early embryonic development
Bone Morphogenetic Proteins (BMPs), a subgroup of the TGF- superfamily, were originally isolated from bone on the basis of their ability to induce ectopic bone development. While BMPs are involved in a wide range of developmental and physiological functions, very few vertebrate target genes in t...
ORGANISM(S): Xenopus laevis 
2010-06-10 | E-GEOD-2274 | biostudies-arrayexpress
TranscriptomicsExpression data from Fine Needle Aspiration (FNA) biopsies from breast cancer patients
This is a stage-matched case control study. Cases with clinical diagnosis of Inflammatory Breast Cancer (IBC) were selected after reviewing all medical records of the 440 FNA samples. IBC was defined as signs of erythema and edema (peau d’orange) involving at least one third of the skin and rapid c...
ORGANISM(S): Homo sapiens 
2011-07-01 | E-GEOD-22597 | biostudies-arrayexpress
TranscriptomicsGenomic Analysis of Microdissected Inflammatory Breast Cancer
Inflammatory breast cancer (IBC) is a unique clinical entity characterized by rapid onset of erythema and swelling of the breast often without an obvious breast mass. Many studies have examined and compared gene expression between IBC and non-IBC (nIBC), repeatedly finding clusters associated with r...
ORGANISM(S): Homo sapiens 
2013-03-29 | E-GEOD-45582 | biostudies-arrayexpress
TranscriptomicsDifferential gene expression profiles between SKOV3.ip1-S116A cells (Ser116 of PEA-15 substituted with alanine) and SKOV3.ip1-S116D cells (Ser116 of PEA-15 substituted with aspartic acid).
To dissect the molecular mechanisms of PEA-15-mediated paclitaxel sensitization in ovarian cancer cells, we performed cDNA microarray analysis using SKOV3.ip1-S116A cells (Ser116 of PEA-15 substituted with alanine) and SKOV3.ip1-S116D cells (Ser116 of PEA-15 substituted with aspartic acid). cDNA mic...
ORGANISM(S): Homo sapiens 
2012-05-11 | E-GEOD-37934 | biostudies-arrayexpress
TranscriptomicsInflammatory Breast Cancer
Gene expression profiles were established for Inflammatory breast cancer samples from patients treated at the Institut Paoli-Calmettes.
ORGANISM(S): Homo sapiens 
2014-01-13 | E-MTAB-1547 | biostudies-arrayexpress
GenomicsICGC breast cancer sequencing project SNP6 data
Affymetrix SNP6.0 breast cancer genome sequencing data
EGAD00010000915 | EGA
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