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Publication Date

2013 (32)
2014 (22)
2010 (21)
2015 (18)
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2011 (14)
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2012 (12)
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2016 (11)
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2005 (8)
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2009 (6)
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2018 (4)

CHEBI ID

CHEBI:149474 (1)
CHEBI:62624 (1)
CHEBI:94483 (1)
CHEBI:139311 (1)
CHEBI:89715 (1)
CHEBI:6401 (1)
CHEBI:188368 (1)
CHEBI:188369 (1)
CHEBI:141209 (1)
CHEBI:64280 (1)
CHEBI:141222 (1)
CHEBI:87328 (1)
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CHEBI:49240 (1)
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CHEBI:87607 (1)
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CHEBI:188366 (1)
CHEBI:173119 (1)
CHEBI:192551 (1)
CHEBI:188367 (1)
CHEBI:188361 (1)
CHEBI:67251 (1)
CHEBI:87301 (1)
CHEBI:80945 (1)
CHEBI:89773 (1)

Metabolite Name

20:4 Cholesteryl ester (1)
18:2 Cholesteryl ester (1)
L-3-hydroxykynurenine (1)
Trans-3-indoleacrylic acid (1)
Eicosatetraynoic acid (1)
D-(+)-tryptophan (1)
Glycocholic acid (1)
20beta-dihydrocortisol (1)
Kynurenic acid (1)
Cyclotetradecane (1)
Octan-3-ol (1)
2-thiophenecarboxaldehyde (1)
1,1,6-trimethyl-1,2-dihydronaphthalene (1)
Ledol (1)
1-octen-3-ol acetate (1)
2H-pyran-2,6(3H)-dione (1)
(E)-2-hexen-1-ol acetate (1)
Ethyl 9-decanoate (1)
(Z)-3-hexen-1-ol (1)
(E)-beta-ocimene (1)
Allocymene (1)
Bicyclo[4.2.0]octa-1,3,5-triene (1)
Alpha-ionene (1)
Neryl ethyl ether (1)
Nerol (1)
Geraniol (1)
Alpha-bisabolene (1)
Geranyl ethyl ether (1)
Geranyl acetate (1)
Safranal (1)

First Public Date

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2015 (3)
2013 (3)
2014 (2)
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Classification

protozoa (1)
bacteria (1)

Study type

Transcription profiling by array (122)
RNA-seq of coding RNA (22)
DNA-seq (10)
Methylation profiling by array (7)
ChIP-seq (6)
RNA-seq of coding RNA from single cells (6)
Other (5)
RNA-seq of non coding RNA (5)
Comparative genomic hybridization by array (3)
Exome sequencing (3)
Genotyping by array (2)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Human - High-throughput sequencing (1)
Plant - High-throughput sequencing (1)
High-throughput sequencing (1)
Whole chromosome random sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Bisulfite-seq (1)
Genotyping by high throughput sequencing (1)

Release Date

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2023 (45)
2024 (41)
2022 (40)
2021 (39)
2013 (34)
2019 (33)
2015 (32)
2014 (31)
2020 (27)
2018 (22)
2010 (21)
2016 (20)
2017 (19)
2011 (15)
2008 (15)
2012 (14)
2026 (10)
2007 (10)
2005 (8)
2009 (7)
2006 (6)
2003 (1)

Lab affiliation

Thoracic and Gastrointestinal Oncology Branch, CCR , NCI, NIH (1)
Tumor Immunology and Immunotherapy group, Vall d'Hebrón Institute of Oncology, Barcelona, Spain (1)
INCLIVA Biomedical Research Institute (1)
Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892 (1)
Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA 7Present address: Bristol Myers Squibb, Lawrenceville, NJ 08901, USA and Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA. (1)
Food Science Research Institue (CIAL, CSIC-UAM) (1)
Molecular Pharmacology Program, Sloan Kettering Institute, Tow Center for Developmental Oncology, Department of Pediatrics, Memorial Sloan Kettering Cancer Center, and Doctor of Medicine Program, Weill Cornell Medicine (1)
Molecular Cell Biolody, Weizmann Institute of Science. (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)

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VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files.

Not available

S-EPMC4793895 | biostudies-literature

Analysis-ready VCF at Biobank scale using Zarr.

Not available

S-EPMC11195102 | biostudies-literature

Sparse Project VCF: efficient encoding of population genotype matrices.

Not available

S-EPMC8016461 | biostudies-literature

RNA-seq of VCAM1-positive cardiac fibroblasts (VCF) and VCAM1-negative cardiac fibroblasts (VNCF).

This experiment aims at comparing the transcriptomic profiles of two subpopulations of fetal human cardiac fibroblasts (HCF) defined by their relative expression of VCAM1. VCAM1-positive and VCAM1-negative populations were isolated from commercial fetal HCF by MACS against VCAM1. The RNA-seq procedu...

ORGANISM(S): Homo sapiens

2020-08-08 | E-MTAB-9161 | biostudies-arrayexpress

VCF files for 300 Hu sheep genomes

PRJEB94328 | ENA

VCF-Server: A web-based visualization tool for high-throughput variant data mining and management.

Not available

S-EPMC6625089 | biostudies-literature

Insane in the vembrane: filtering and transforming VCF/BCF files.

Not available

S-EPMC9825764 | biostudies-literature

Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR.

Not available