Vidal M M - OmicsDI

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Unknown (2919)
Transcriptomics (83)
Proteomics (65)
Genomics (39)
Metabolomics (11)

Organisms

Homo sapiens (90)
Mus musculus (47)
Arabidopsis thaliana (5)
Saccharomyces cerevisiae (4)
Pleuronichthys verticalis (3)
Danio rerio (3)
Chlamydomonas reinhardtii (3)
Caenorhabditis elegans (2)
Rattus norvegicus (2)
Galleria mellonella (2)
Gillichthys mirabilis (1)
Pimephales promelas (1)
Zea mays subsp. mays (1)
Canis lupus familiaris (1)
unidentified (1)
Alteromonas macleodii (1)
Bos taurus (1)
Chaetodon lunulatus (1)
Chlorocebus (1)
Equus caballus (1)
Mytilus galloprovincialis (1)
Strigomonas culicis (1)
Trichomonas vaginalis (1)
Trypanosoma cruzi Dm28c (1)
Vespa velutina nigrithorax (1)
Vespa velutina velutina (1)
unclassified Bacteria (1)

Organisms

marine metagenome (1)
Drosophila melanogaster (1)

Repository

biostudies-arrayexpress (94)
pride (53)
EGA (26)
MetaboLights (10)
MassIVE (9)
PAXDB (3)
ENA (3)
GNPS (1)

Tissue

Cell culture (12)
Cell suspension culture (7)
Brain (6)
Epithelial cell (4)
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Plant cell (3)
Gill (2)
Liver (2)
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B cell (1)
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Cell in vitro (1)
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Malignant cell (1)
Peritoneal dialysis fluid (1)
Platelet (1)
Root (1)
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Skeletal muscle (1)
Skeletal muscle cell (1)
Somatic muscle myotube (1)
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Urine (1)

Disease

Breast cancer (2)
Gerstmann-Straussler-Scheinker syndrome (2)
Melanoma (2)
Fish tuberculosis (1)
Alzheimer's disease (1)
Brain glioblastoma multiforme (1)
Cerebral amyloid angiopathy (1)
Cervix carcinoma (1)
Colon cancer (1)
Colorectal cancer (1)
Disease free (1)
Endometrial cancer (1)
Head and neck cancer (1)
Huntington Disease (1)
Malignant neoplasm of ovary (1)
Multiple sclerosis (1)
Neurodegenerative disease (1)
Oral squamous cell carcinoma (1)
Parkinson's disease (1)
Polycystic liver disease (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (53)
Shotgun proteomics (31)
Mass spectrometry (8)
Gel-based experiment (7)
Bottom-up proteomics (6)
SWATH MS (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
SRM/MRM (2)
Top-down proteomics (2)
AB 5500xl Genetic Analyzer (1)
Affymetrix_SNP6_raw, Illumina HT 12, Agilent ncRNA 60k (1)
NMR spectroscopy (1)
NMR spectroscopy assay (1)
Data-independent acquisition (1)

Instrument Platform

Gas Chromatography MS - positive (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1 (1)
Illumina Nextera XT index kits (Set A–D) (1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies) (1)
Aria III (BD Biosciences) (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 3000 (1)
LTQ Orbitrap XL (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)
Nuclear Magnetic Resonance (NMR) - - - Bruker (1)
Q Exactive Plus (Thermo Scientific) (1)

Publication Date

2013 (25)
2012 (19)
2022 (16)
2019 (13)
2014 (11)
2021 (10)
2015 (9)
2011 (9)
2025 (9)
2010 (7)
2023 (7)
2020 (6)
2018 (5)
2008 (4)
2005 (4)
2024 (4)
2026 (3)
2016 (3)
2009 (2)
2007 (2)
2017 (1)
2006 (1)

UNIPROT ID/AC

1433B_MOUSE (3)
1433E_MOUSE (3)
1433F_MOUSE (3)
1433G_MOUSE (3)
1433T_MOUSE (3)
1433Z_MOUSE (3)
2AAA_MOUSE (3)
3HIDH_MOUSE (3)
4F2_MOUSE (3)
6PGD_MOUSE (3)
6PGL_MOUSE (3)
AATC_MOUSE (3)
AATM_MOUSE (3)
ABCB7_MOUSE (3)
ABCE1_MOUSE (3)
ACACA_MOUSE (3)
ACAD9_MOUSE (3)
ACADL_MOUSE (3)
ACADM_MOUSE (3)
ACLY_MOUSE (3)
ACO13_MOUSE (3)
ACON_MOUSE (3)
ACSF2_MOUSE (3)
ACTBL_MOUSE (3)
ACTB_MOUSE (3)
ACTN4_MOUSE (3)
ACTZ_MOUSE (3)
ADHX_MOUSE (3)
ADT1_MOUSE (3)
ADT2_MOUSE (3)

CHEBI ID

CHEBI:16449 (5)
CHEBI:6650 (5)
CHEBI:15428 (4)
CHEBI:17754 (4)
CHEBI:17822 (4)
CHEBI:18012 (4)
CHEBI:22653 (4)
CHEBI:22660 (4)
CHEBI:26271 (4)
CHEBI:28300 (4)
CHEBI:30769 (4)
CHEBI:78320 (4)
CHEBI:15354 (3)
CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16010 (3)
CHEBI:16704 (3)
CHEBI:16742 (3)
CHEBI:16750 (3)
CHEBI:16811 (3)
CHEBI:16958 (3)
CHEBI:17084 (3)
CHEBI:17234 (3)
CHEBI:17345 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:17634 (3)
CHEBI:17821 (3)
CHEBI:18066 (3)
CHEBI:18186 (3)

Metabolite Name

Alanine (3)
Cysteine (3)
Glycerol (3)
Glycine (3)
Serine (3)
Succinic acid (3)
Uracil (3)
2-hydroxyglutaric acid (2)
Adenine (2)
Alanine (2)
Arginine (2)
Asparagine (2)
Aspartic acid (2)
Choline (2)
Citric acid (2)
Citrulline (2)
Cystathionine (2)
D-glucose (2)
Fructose (2)
Fumaric acid (2)
Glutamate (2)
Glutamine (2)
Glutamine (2)
Isoleucine (2)
Leucine (2)
Phenylalanine (2)
Threonine (2)
Tyrosine (2)
UDP-D-glucose (2)
Valine (2)

First Public Date

2020 (1)
2016 (1)
2013 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (58)
ChIP-seq (7)
RNA-seq of coding RNA (6)
Other (4)
ChIP-chip by array (3)
RNA-seq of coding RNA from single cells (3)
Methylation profiling by high throughput sequencing (3)
ChIP-chip by tiling array (2)
Methylation profiling by array (2)
Unknown experiment type (1)
Human - Two-color microarray (1)
High-throughput sequencing (1)
MicroRNA profiling by high throughput sequencing (1)
Comparative genomic hybridization by array (1)

Release Date

2022 (396)
2021 (340)
2025 (333)
2023 (315)
2024 (262)
2020 (228)
2019 (194)
2018 (156)
2017 (122)
2015 (116)
2016 (115)
2014 (90)
2012 (68)
2013 (54)
2026 (50)
2011 (45)
2010 (29)
2009 (27)
2007 (19)
2008 (17)
2005 (9)
2004 (8)
2006 (7)
2001 (5)
2000 (4)
2002 (3)
1996 (1)

Lab affiliation

Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany (3)
Centro de Investigaciones Biológicas Margarita Salas, CSIC, Madrid, Spain (2)
Instituto de Investigaciones Sanitarias de Santiago de Compostela (2)
Vanderbilt University (2)
Biochemistry and Molecular Biology, Indiana University School of Medicine (1)
CR Université Grenoble Alpes, Institute for Advanced Biosciences, INSERM U1209, CNRS UMR5309, La Tronche, France. (1)
CRG, UPF (1)
CSIC/UAB Proteomics Laboratory, IIBB-CSIC, Barcelona, Spain (1)
Cambridge University (1)
Department of Biochemistry University of Cambridge Cambridge UK (1)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (1)
Department of Cellular and Molecular Medicine, University of Copenhagen (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Department of Neuro- and Sensory Physiology University Medical Center Göttingen Humboldtallee 23 37073 Göttingen (1)
Department of Tumor Biology, University Medical Center Hamburg‑Eppen‑dorf, Martinistraße 52, 20246 Hamburg, Germany. (1)
Dept. of Pathology and Laboratory Medicine, Indiana University School of Medicine, 635 Barnhill Dr., MSB A136, Indianapolis, IN 46202 (1)
Donnelly Centre, University of Toronto Lunenfeld-Tanenbaum Research Institute, Sinai Health System (1)
EDyP (1)
Fundacion Instituto de Investigaciones Sanitarias de Santiago de Compostela (1)
Fundacion Instituto de Investigaciones Sanitarias de santiago de Compostela (1)
GIGA-Molecular Biology of Diseases-Viral Interactomes Network, Unniversité de Liège, Belgium (1)
Gene Regulation, Stem Cells and Cancer Program Centre de Regulació Genòmica (CRG) The Barcelona Institute of Science and Technology PRBB Dr. Aiguader 88 E-08003 Barcelona Spain Tlf +34 93 316 0119 Fax +34 93 316 0099 e-mail: miguel.beato@crg.eu Secretary: Gemma Perez Tlf +34 93 316 0165 e-mail: gemma.perez@crg.eu www.crg.eu/4dgenome (1)
Histon Modifications Group BioMedical Center Ludwig-Maximilians-Universität Großhadernerstr. 9 82152 Planegg-Martinsried Tel: +49 89 2180 75775 (1)
Institut des Sciences du Sport de l'Université de Lausanne Bâtiment Synathlon 1015 Lausanne Switzerland (1)
Institute for Integrative Systems Biology (I2SysBio), Universitat de València, Paterna, Spain Darwin Bioprospecting Excellence SL, Parc Científic Universitat de València, Spain (1)
Institute for Microbiology, University of Greifswald, Felix-Hausdorff-Straße 8, 17489 Greifswald, Germany (1)
Institute of Metabolic Science, University of Cambridge (1)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse, France (1)
Institute of Sports Sciences, Faculty of Biology and Medicine, University of Lausanne (1)
Instituto de Investigaciones Sanitarios de Santiago de Compostela (1)

Tags

xref:EuropePMC:PMC10936187 (1)
xref:EuropePMC:PMC10359470 (1)
xref:EuropePMC:PMC10634959 (1)
xref:EuropePMC:PMC4585252 (1)
xref:EuropePMC:PMC9418006 (1)
xref:EuropePMC:PMC10762198 (1)
xref:EuropePMC:PMC9796713 (1)

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Machine-learning guided Venom Induced Dermonecrosis Analysis tooL: VIDAL.

Not available

S-EPMC10709447 | biostudies-literature

Impact of Torulaspora delbrueckii During Fermentation on Aromatic Profile of Vidal Blanc Icewine.

Not available

S-EPMC9209767 | biostudies-literature

Use of Indigenous Hanseniaspora vineae and Metschnikowia pulcherrima Co-fermentation With Saccharomyces cerevisiae to Improve the Aroma Diversity of Vidal Blanc Icewine.

Not available

S-EPMC6204404 | biostudies-literature

Identification of MicroRNAs Inhibiting TGF-beta-Induced IL-11 Production in Bone Metastatic Breast Cancer Cells

ORGANISM(S): Homo sapiens

2012-11-22 | E-TABM-1220 | biostudies-arrayexpress

Zoonotic tuberculosis in Catalonia, Spain: Phylogenetic insights into <i>Mycobacterium bovis</i> and <i>M. caprae</i> transmission at the human-livestock interface.

Not available

S-EPMC11875796 | biostudies-literature

Highly Sensitive and Specific Multiplex Antibody Assays To Quantify Immunoglobulins M, A, and G against SARS-CoV-2 Antigens.

Not available

S-EPMC8111153 | biostudies-literature

Text messaging as a tool to improve cancer screening programs (M-TICS Study): A randomized controlled trial protocol.

Not available

S-EPMC7822525 | biostudies-literature

Phylogenetic evidence of extensive spatial mixing of diverse HIV-1 group M lineages within Cameroon but not between its neighbours.

Not available

S-EPMC11463025 | biostudies-literature

Changes of overweight and obesity in the adult Swiss population according to educational level, from 1992 to 2007.

Not available

S-EPMC2831837 | biostudies-literature

Gut microbiome dysbiosis drives metabolic dysfunction in Familial dysautonomia

Familial dysautonomia (FD) is a rare genetic neurologic disorder caused by impaired neuronal development and progressive degeneration of both the peripheral and central nervous systems. FD is monogenic, with >99.4% of patients sharing an identical point mutation in the elongator acetyltransferase co...

2022-12-06 | MTBLS5138 | MetaboLights

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3118 Results

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