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Unknown
(2919)
Transcriptomics
(83)
Proteomics
(65)
Genomics
(39)
Metabolomics
(10)
Organisms
Homo sapiens
(90)
Mus musculus
(47)
Arabidopsis thaliana
(5)
Saccharomyces cerevisiae
(4)
Pleuronichthys verticalis
(3)
Danio rerio
(3)
Chlamydomonas reinhardtii
(3)
Caenorhabditis elegans
(2)
Rattus norvegicus
(2)
Galleria mellonella
(2)
Gillichthys mirabilis
(1)
Pimephales promelas
(1)
Zea mays subsp. mays
(1)
Canis lupus familiaris
(1)
unidentified
(1)
Alteromonas macleodii
(1)
Bos taurus
(1)
Chaetodon lunulatus
(1)
Chlorocebus
(1)
Equus caballus
(1)
Mytilus galloprovincialis
(1)
Strigomonas culicis
(1)
Trichomonas vaginalis
(1)
Trypanosoma cruzi Dm28c
(1)
Vespa velutina nigrithorax
(1)
Vespa velutina velutina
(1)
unclassified Bacteria
(1)
Organisms
marine metagenome
(1)
Drosophila melanogaster
(1)
Repository
biostudies-arrayexpress
(94)
pride
(53)
EGA
(26)
MassIVE
(9)
MetaboLights
(9)
PAXDB
(3)
ENA
(3)
GNPS
(1)
Tissue
Cell culture
(12)
Cell suspension culture
(7)
Brain
(6)
Epithelial cell
(4)
Photosynthetic cell
(3)
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(3)
Gill
(2)
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(2)
Permanent cell line cell
(2)
Saliva
(2)
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(1)
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(1)
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(1)
Cell in vitro
(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
Peritoneal dialysis fluid
(1)
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(1)
Root
(1)
Sac
(1)
Skeletal muscle
(1)
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(1)
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(1)
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(1)
Urine
(1)
Disease
Breast cancer
(2)
Gerstmann-Straussler-Scheinker syndrome
(2)
Melanoma
(2)
Fish tuberculosis
(1)
Alzheimer's disease
(1)
Brain glioblastoma multiforme
(1)
Cerebral amyloid angiopathy
(1)
Cervix carcinoma
(1)
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(1)
Colorectal cancer
(1)
Disease free
(1)
Endometrial cancer
(1)
Head and neck cancer
(1)
Huntington Disease
(1)
Malignant neoplasm of ovary
(1)
Multiple sclerosis
(1)
Neurodegenerative disease
(1)
Oral squamous cell carcinoma
(1)
Parkinson's disease
(1)
Polycystic liver disease
(1)
Trypanosomiasis
(1)
Technology Type
Mass Spectrometry
(53)
Shotgun proteomics
(31)
Mass spectrometry
(7)
Gel-based experiment
(7)
Bottom-up proteomics
(6)
SWATH MS
(5)
Affinity purification coupled with mass spectrometry proteomics
(4)
Chemical cross-linking coupled with mass spectrometry proteomics
(2)
Data-dependent acquisition
(2)
SRM/MRM
(2)
Top-down proteomics
(2)
AB 5500xl Genetic Analyzer
(1)
Affymetrix_SNP6_raw, Illumina HT 12, Agilent ncRNA 60k
(1)
NMR spectroscopy
(1)
NMR spectroscopy assay
(1)
Data-independent acquisition
(1)
Instrument Platform
Gas Chromatography MS - positive
(3)
Illumina HiSeq 2000
(2)
Illumina HiSeq 4000
(2)
STAR v2.5.3a, rpkmforgenes, RSeQC 2.6.1
(1)
Illumina Nextera XT index kits (Set A–D)
(1)
Oligo(dT) primer and SuperScript II reverse transcriptase (ThermoFisher Scientific), TapeStation 4200 or 2100 Bioanalyzer with a DNA High Sensitivity chip (Agilent Biotechnologies)
(1)
Aria III (BD Biosciences)
(1)
Illumina HiSeq 1500
(1)
Illumina HiSeq 2500
(1)
Illumina NovaSeq 6000
(1)
Illumina HiSeq 3000
(1)
LTQ Orbitrap XL
(1)
LTQ Orbitrap Velos
(1)
Orbitrap Fusion Lumos
(1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating))
(1)
Liquid Chromatography MS - Positive (LC-MS (Positive))
(1)
Liquid Chromatography MS - alternating - hilic
(1)
Liquid Chromatography MS - alternating - reverse phase
(1)
Liquid Chromatography MS - alternating - reverse-phase
(1)
Liquid Chromatography MS - positive - reverse phase
(1)
Nuclear Magnetic Resonance (NMR) -
(1)
Nuclear Magnetic Resonance (NMR) - - - Bruker
(1)
Publication Date
2013
(25)
2012
(19)
2022
(16)
2019
(13)
2014
(11)
2021
(10)
2015
(9)
2011
(9)
2025
(9)
2010
(7)
2023
(7)
2018
(5)
2020
(5)
2008
(4)
2005
(4)
2024
(4)
2026
(3)
2016
(3)
2009
(2)
2007
(2)
2017
(1)
2006
(1)
UNIPROT ID/AC
1433B_MOUSE
(3)
1433E_MOUSE
(3)
1433F_MOUSE
(3)
1433G_MOUSE
(3)
1433T_MOUSE
(3)
1433Z_MOUSE
(3)
2AAA_MOUSE
(3)
3HIDH_MOUSE
(3)
4F2_MOUSE
(3)
6PGD_MOUSE
(3)
6PGL_MOUSE
(3)
AATC_MOUSE
(3)
AATM_MOUSE
(3)
ABCB7_MOUSE
(3)
ABCE1_MOUSE
(3)
ACACA_MOUSE
(3)
ACAD9_MOUSE
(3)
ACADL_MOUSE
(3)
ACADM_MOUSE
(3)
ACLY_MOUSE
(3)
ACO13_MOUSE
(3)
ACON_MOUSE
(3)
ACSF2_MOUSE
(3)
ACTBL_MOUSE
(3)
ACTB_MOUSE
(3)
ACTN4_MOUSE
(3)
ACTZ_MOUSE
(3)
ADHX_MOUSE
(3)
ADT1_MOUSE
(3)
ADT2_MOUSE
(3)
CHEBI ID
CHEBI:16449
(5)
CHEBI:6650
(5)
CHEBI:15428
(4)
CHEBI:17754
(4)
CHEBI:17822
(4)
CHEBI:18012
(4)
CHEBI:22653
(4)
CHEBI:22660
(4)
CHEBI:26271
(4)
CHEBI:28300
(4)
CHEBI:30769
(4)
CHEBI:78320
(4)
CHEBI:15354
(3)
CHEBI:15741
(3)
CHEBI:15756
(3)
CHEBI:16010
(3)
CHEBI:16704
(3)
CHEBI:16742
(3)
CHEBI:16750
(3)
CHEBI:16811
(3)
CHEBI:16958
(3)
CHEBI:17084
(3)
CHEBI:17234
(3)
CHEBI:17345
(3)
CHEBI:17568
(3)
CHEBI:17596
(3)
CHEBI:17634
(3)
CHEBI:17821
(3)
CHEBI:18066
(3)
CHEBI:18186
(3)
Metabolite Name
Alanine
(2)
Alanine
(2)
Asparagine
(2)
Choline
(2)
Citrulline
(2)
Cysteine
(2)
D-glucose
(2)
Fructose
(2)
Glutamate
(2)
Glutamine
(2)
Glycerol
(2)
Glycine
(2)
Homocysteine
(2)
Isoleucine
(2)
Lactate
(2)
Leucine
(2)
Malate
(2)
Methionine
(2)
Phenylalanine
(2)
Proline
(2)
Serine
(2)
Succinic acid
(2)
Threonine
(2)
Thymine
(2)
Tyrosine
(2)
UDP-D-glucose
(2)
Uracil
(2)
Uridine
(2)
Valine
(2)
(3S)-3-hydroxy-3-methylglutaryl-CoA
(1)
First Public Date
2020
(1)
2016
(1)
2013
(1)
Modification
2x(15)N labeled L-lysine
(1)
4x(15)N labeled L-arginine
(1)
Study type
Transcription profiling by array
(58)
ChIP-seq
(7)
RNA-seq of coding RNA
(6)
Other
(4)
ChIP-chip by array
(3)
RNA-seq of coding RNA from single cells
(3)
Methylation profiling by high throughput sequencing
(3)
ChIP-chip by tiling array
(2)
Methylation profiling by array
(2)
Unknown experiment type
(1)
Human - Two-color microarray
(1)
High-throughput sequencing
(1)
MicroRNA profiling by high throughput sequencing
(1)
Comparative genomic hybridization by array
(1)
Release Date
2022
(396)
2021
(340)
2025
(333)
2023
(315)
2024
(262)
2020
(228)
2019
(194)
2018
(156)
2017
(122)
2015
(116)
2016
(115)
2014
(90)
2012
(68)
2013
(54)
2026
(50)
2011
(45)
2010
(29)
2009
(27)
2007
(19)
2008
(17)
2005
(9)
2004
(8)
2006
(7)
2001
(5)
2000
(4)
2002
(3)
1996
(1)
Lab affiliation
Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany
(3)
Centro de Investigaciones Biológicas Margarita Salas, CSIC, Madrid, Spain
(2)
Instituto de Investigaciones Sanitarias de Santiago de Compostela
(2)
Vanderbilt University
(2)
Biochemistry and Molecular Biology, Indiana University School of Medicine
(1)
CR Université Grenoble Alpes, Institute for Advanced Biosciences, INSERM U1209, CNRS UMR5309, La Tronche, France.
(1)
CRG, UPF
(1)
CSIC/UAB Proteomics Laboratory, IIBB-CSIC, Barcelona, Spain
(1)
Cambridge University
(1)
Department of Biochemistry University of Cambridge Cambridge UK
(1)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain
(1)
Department of Cellular and Molecular Medicine, University of Copenhagen
(1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA
(1)
Department of Neuro- and Sensory Physiology University Medical Center Göttingen Humboldtallee 23 37073 Göttingen
(1)
Department of Tumor Biology, University Medical Center Hamburg‑Eppen‑dorf, Martinistraße 52, 20246 Hamburg, Germany.
(1)
Dept. of Pathology and Laboratory Medicine, Indiana University School of Medicine, 635 Barnhill Dr., MSB A136, Indianapolis, IN 46202
(1)
Donnelly Centre, University of Toronto Lunenfeld-Tanenbaum Research Institute, Sinai Health System
(1)
EDyP
(1)
Fundacion Instituto de Investigaciones Sanitarias de Santiago de Compostela
(1)
Fundacion Instituto de Investigaciones Sanitarias de santiago de Compostela
(1)
GIGA-Molecular Biology of Diseases-Viral Interactomes Network, Unniversité de Liège, Belgium
(1)
Gene Regulation, Stem Cells and Cancer Program Centre de Regulació Genòmica (CRG) The Barcelona Institute of Science and Technology PRBB Dr. Aiguader 88 E-08003 Barcelona Spain Tlf +34 93 316 0119 Fax +34 93 316 0099 e-mail: miguel.beato@crg.eu Secretary: Gemma Perez Tlf +34 93 316 0165 e-mail: gemma.perez@crg.eu www.crg.eu/4dgenome
(1)
Histon Modifications Group BioMedical Center Ludwig-Maximilians-Universität Großhadernerstr. 9 82152 Planegg-Martinsried Tel: +49 89 2180 75775
(1)
Institut des Sciences du Sport de l'Université de Lausanne Bâtiment Synathlon 1015 Lausanne Switzerland
(1)
Institute for Integrative Systems Biology (I2SysBio), Universitat de València, Paterna, Spain Darwin Bioprospecting Excellence SL, Parc Científic Universitat de València, Spain
(1)
Institute for Microbiology, University of Greifswald, Felix-Hausdorff-Straße 8, 17489 Greifswald, Germany
(1)
Institute of Metabolic Science, University of Cambridge
(1)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse, France
(1)
Institute of Sports Sciences, Faculty of Biology and Medicine, University of Lausanne
(1)
Instituto de Investigaciones Sanitarios de Santiago de Compostela
(1)
Tags
xref:EuropePMC:PMC10936187
(1)
xref:EuropePMC:PMC10359470
(1)
xref:EuropePMC:PMC10634959
(1)
xref:EuropePMC:PMC4585252
(1)
xref:EuropePMC:PMC9418006
(1)
xref:EuropePMC:PMC10762198
(1)
xref:EuropePMC:PMC9796713
(1)
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Machine-learning guided Venom Induced Dermonecrosis Analysis tooL: VIDAL.
Not available
S-EPMC10709447
|
biostudies-literature
Cite
Impact of
Torulaspora delbrueckii
During Fermentation on Aromatic Profile of Vidal Blanc Icewine.
Not available
S-EPMC9209767
|
biostudies-literature
Cite
Use of Indigenous
Hanseniaspora vineae
and
Metschnikowia pulcherrima
Co-fermentation With
Saccharomyces cerevisiae
to Improve the Aroma Diversity of Vidal Blanc Icewine.
Not available
S-EPMC6204404
|
biostudies-literature
Cite
Identification of MicroRNAs Inhibiting TGF-beta-Induced IL-11 Production in Bone Metastatic Breast Cancer Cells
Identification of MicroRNAs Inhibiting TGF-beta-Induced IL-11 Production in Bone Metastatic Breast Cancer Cells
ORGANISM(S):
Homo sapiens
2012-11-22
|
E-TABM-1220
|
biostudies-arrayexpress
Cite
Zoonotic tuberculosis in Catalonia, Spain: Phylogenetic insights into <i>Mycobacterium bovis</i> and <i>M. caprae</i> transmission at the human-livestock interface.
Not available
S-EPMC11875796
|
biostudies-literature
Cite
Highly Sensitive and Specific Multiplex Antibody Assays To Quantify Immunoglobulins M, A, and G against SARS-CoV-2 Antigens.
Not available
S-EPMC8111153
|
biostudies-literature
Cite
Text messaging as a tool to improve cancer screening programs (M-TICS Study): A randomized controlled trial protocol.
Not available
S-EPMC7822525
|
biostudies-literature
Cite
Phylogenetic evidence of extensive spatial mixing of diverse HIV-1 group M lineages within Cameroon but not between its neighbours.
Not available
S-EPMC11463025
|
biostudies-literature
Cite
Changes of overweight and obesity in the adult Swiss population according to educational level, from 1992 to 2007.
Not available
S-EPMC2831837
|
biostudies-literature
Cite
Fecal immunochemical test accuracy in average-risk colorectal cancer screening.
Not available
S-EPMC3921527
|
biostudies-literature
Cite
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