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TranscriptomicsRNA-Seq of cKIT+ sorted cells from 16-16.5 week old fetal testes and ovaries and RNA-Seq of TRA-1-60+ H1 hESCs
Generation of research quality, clinically relevant cell types in vitro from human pluripotent stem cells (hPSCs) requires detailed understanding of the equivalent cell types in humans. Here we analyzed 130 human fetal samples at 6-20 weeks of development and identified the stages in which human cKI...
ORGANISM(S): Homo sapiens 
2012-08-03 | E-GEOD-39821 | biostudies-arrayexpress
ProteomicsCommon and ancestral histone patterns in newly identified human cellular structures.
High resolution Mass Spectrometry and Peptides identification uncovered ancestral giant insect viruses motifs within Histone-4 peptides in human liver cells. These peptides did not match any human sequence. This finding consolidates the dogma that molecular patterns are universal and suggests that...
ORGANISM(S): Homo sapiens (Human) 
2017-03-03 | PXD004986 | Pride
Human Orbitrap 
TranscriptomicsInterferon and ribavirin treatment in a rhesus macaque model of novel Middle East respiratory syndrome coronavirus (MERS-CoV) infection (hCoV-EMC)
Microarray analysis of lungs (right lower lobe) on day 3 post-infection with MERS-CoV with and without treatment beginning 8 h post-infection with intravenous type I interferon (IFN) and ribavirin (RBV). Dosages are as follows: IFN a2b 5 million IU/kg s.c. q8, RBV loading dose 50mg/kg i.v.; RBV mai...
ORGANISM(S): Macaca mulatta 
2013-09-06 | E-GEOD-47957 | biostudies-arrayexpress
TranscriptomicsCynomolgus macaque model of H7N9 influenza infection
The objective of this study is to characterize the response to newly emerged, highly pathogenic H7N9 influenza virus isolated from human patients in 2013 in China. This study examines the pathogenesis of H7N9 influenza in cynomolgus macaques. The study compares lung lesions to adjacent right lowe...
ORGANISM(S): Macaca fascicularis 
2014-07-22 | E-GEOD-48976 | biostudies-arrayexpress
MetabolomicsGNPS - MITOMICS: defining mitochondrial protein functions through deep multi-omic profiling
Mitochondria are epicenters of eukaryotic metabolism and bioenergetics. Pioneering efforts in recent decades have established the core protein componentry of these organelles and have linked their dysfunction to over 150 distinct disorders. However, hundreds of mitochondrial proteins still lack clea...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-01-11 | MSV000086685 | GNPS
TranscriptomicsTranscription profiling of human hyperdiploid multiple myeloma compared to non hyperdiploid multiple myeloma
Multiple myeloma is a relatively common B-cell malignancy that is currently incurable. Certain recurrent genetic abnormalities characteristics of different genetic subtypes have been described. Hyperdiploid myeloma characterized by recurrent trisomies is the most common genetic subtypes. However lit...
ORGANISM(S): Homo sapiens 
2008-06-15 | E-GEOD-6477 | biostudies-arrayexpress
TranscriptomicsRhesus macaque model of hCoV-EMC respiratory infection
Microarray analysis of peripheral blood mononuclear cells (PBMCs), lungs, and lung lesions collected over the course of hCoV-EMC infection of 6 rhesus macaques. 6 rhesus macaques were infected intratracheally with hCoV-EMC. PBMCs were collected at days 0, 1, 3, and 6, and lungs were collected from s...
ORGANISM(S): Macaca mulatta 
2013-08-29 | E-GEOD-44542 | biostudies-arrayexpress
ProteomicsMITOMICS: defining mitochondrial protein functions through deep multi-omic profiling
Mitochondria are epicenters of eukaryotic metabolism and bioenergetics. Pioneering efforts in recent decades have established the core protein componentry of these organelles and have linked their dysfunction to over 150 distinct disorders. However, hundreds of mitochondrial proteins still lack clea...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-01-11 | MSV000086685 | MassIVE
TranscriptomicsTranscriptome analysis of EYA2 non-expressing pancreatic cancer cell lines with stable transfectant overexpressing EYA2
Transcriptome analysis of EYA2 non-expressing pancreatic cancer cell lines with stable transfectant overexpressing EYA2 We analyzed Panc2.5 and Panc3.014 stable transfectant (overexpressing EYA2) and control (empty pcDNA6.2/cLumio-DEST vector) cell transcriptomes using the Affymetrix Exon Array ST1....
ORGANISM(S): Homo sapiens 
2012-06-29 | E-GEOD-33282 | biostudies-arrayexpress
GenomicsThe Ovarian Cancer Association Consortium OncoArray genome-wide association study
A custom Illumina genotyping array, the OncoArray. The array includes a genome-wide backbone, comprising 230,000 SNPs tagging most common genetic variants, together with dense mapping of known susceptibility regions, rare variants from sequencing experiments, pharmacogenetic markers, and cancer-rela...
EGAS00001002305 | EGA
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