Viperidae - OmicsDI

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Unknown (114)
Genomics (17)
Proteomics (13)
Metabolomics (5)
Transcriptomics (2)
Other (1)

Organisms

Schizophyllum commune H4-8 (12)
Mycobacterium tuberculosis SP7 (12)
Oryza sativa Japonica Group (12)
Eriocheir sinensis (12)
Candidatus Endoriftia persephonae (12)
Mycobacterium tuberculosis SP10 (12)
Mycobacterium tuberculosis SP13 (12)
Mycobacterium tuberculosis SP22 (12)
Enterobacter ludwigii (12)
Chlamydomonas reinhardtii (12)
Lama (12)
Pyricularia oryzae P131 (12)
Enterococcus mundtii CRL35 (12)
Pongo pygmaeus (12)
Oncorhynchus tshawytscha (12)
Pseudomonas canadensis (12)
Strongylocentrotus purpuratus (12)
Influenza A virus (A/California/04/2009(H1N1)) (12)
Salmonella enterica subsp. enterica serovar Typhimurium (12)
Homo (12)
Bradyrhizobium diazoefficiens (12)
Pseudomonas aeruginosa PAO1H2O (12)
Human alphaherpesvirus 1 strain 17 (12)
Quercus petraea (12)
Canis lupus (12)
Mycobacterium tuberculosis SP1 (12)
Marchantia polymorpha subsp. ruderalis (12)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (12)
Homo sapiens (3)
Mus musculus (1)

Organisms

Bothrops pictus (3)
Vipera latastei (3)
Azemiops feae (1)
Vipera seoanei (1)
Crotalus pyrrhus (1)

Repository

ENA (14)
pride (12)
MetaboLights (4)
EGA (3)
biostudies-arrayexpress (2)
MassIVE (2)
GNPS (1)

Tissue

Venom (5)
Saliva (4)
Epithelial cell (2)
Trachea gland (1)
Venom gland (1)
Early embryonic cell (1)
Cell culture (1)

Disease

Vector-borne bite transmission (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (7)
Mass spectrometry (3)
Gel-based experiment (3)
Bottom-up proteomics (2)
Mass spectrometry assay (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Q Exactive (2)
NA (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap XL (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2026 (4)
2023 (4)
2021 (3)
2018 (3)
2025 (3)
2009 (1)
2020 (1)
2019 (1)
2017 (1)

CHEBI ID

CHEBI:73701 (2)
CHEBI:15354 (2)
CHEBI:57589 (2)
CHEBI:17596 (2)
CHEBI:16335 (2)
CHEBI:16750 (2)
CHEBI:17368 (2)
CHEBI:16235 (2)
CHEBI:17562 (2)
CHEBI:194215 (1)
CHEBI:194213 (1)
CHEBI:194214 (1)
CHEBI:141447 (1)
CHEBI:141426 (1)
CHEBI:7524 (1)
CHEBI:32401 (1)
CHEBI:73806 (1)
CHEBI:141391 (1)
CHEBI:15405 (1)
CHEBI:141390 (1)
CHEBI:141452 (1)
CHEBI:141433 (1)
CHEBI:141442 (1)
CHEBI:141407 (1)
CHEBI:141406 (1)
CHEBI:141403 (1)
CHEBI:141412 (1)
CHEBI:73803 (1)
CHEBI:74709 (1)
CHEBI:141404 (1)

Metabolite Name

Adenosine (2)
Hypoxanthine (2)
Guanine (2)
Choline (2)
Guanosine (2)
Oxo proline (1)
PGP(GC)P(R)G(PE)PIPP (1)
PE(NH) (1)
Pyroglutamate (Oxoproline) (1)
PP (1)
PEH (1)
(QPQG)RPPHVPP (1)
PEKWV(GP)G(PE)PIPP (1)
VP (1)
PE(VSMAHAAWAL)DIPP (1)
TPPAGPDVGPR (1)
PEKW (1)
Quercetin 3-O-glucoside 7-O-rhamnoside (1)
Kaempferol 3-O-glucoside 7-O-rhamnoside (1)
S-Adenosyl methionine (1)
4-[(2E)-3,7-dimethyl-5-oxoocta-2,6-dienyl]-3-methylideneoxolan-2-one (1)
Pyridoxamine-5'-phosphate (1)
4-hydroxy-4-[(E)-3-hydroxybut-1-enyl]-3,5,5-trimethylcyclohex-2-en-1-one (1)
(2E)-11-Hydroxy-2-dodecenoic acid (1)
N-epsilon,N-epsilon,N-epsilon-Trimethyllysine (1)
Alpha-aminopimelic acid (1)
N-Acetyl-L-ornithine (1)
Fenchyl alcohol (1)
Pyridoxol (1)
L-Methionine methylsulfonium (1)

First Public Date

2026 (6)
2022 (3)
2025 (1)
2024 (1)
2021 (1)
2019 (1)
2014 (1)

Modification

4x(2)H labeled dimethylated L-lysine (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2023 (19)
2022 (13)
2020 (11)
2025 (10)
2021 (10)
2024 (9)
2018 (7)
2016 (7)
2019 (6)
2017 (6)
2013 (3)
2026 (2)
2009 (2)
2015 (2)
2014 (2)
2010 (2)
2006 (2)
2007 (1)
2003 (1)
1998 (1)

Lab affiliation

Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC (2)
Director, Institute of Advanced Study in Science and Technology (IASST), Vigyan Path, Paschim Boragaon, Guwahati 781035, Assam, India (lab head) (1)
Department of Biochemistry/Venom, Antivenom and Natural Toxins Research Centre, Ahmadu Bello University, Zaria (1)
Laboratory of Mass Spectrometry, MolSys Research Unit, University of Liège, 4000 Liège, Belgium (1)
Laboratório Especial de Toxinologia Aplicada, Instituto Butantan,Av. Vital Brasil 1500, 05503-000, São Paulo, Brazil. (1)
Professor, Department of Molecular Biology and Biotechnology, Tezpur University, Tezpur, India (1)
Institute of Inorganic and Analytical Chemistry, Justus Liebig University Giessen, 35392 Giessen, Germany (1)
Protein Analytics, INstitute of Biochemistry, Faculty of medicine, University Giessen (1)
Director, Institute of Advanced Study in Science and Technology (IASST), Vigyan Path, Paschim Boragaon, Guwahati 781035, Assam, India (1)
Professor, Department of Molecular Biology and Biotechnology, Tezpur University, India (1)
Professor, Department of Molecular Biology and Biotechnology, Tezpur University, Assam, India- 784028 (1)

Tags

xref:PubMed:33911273 (5)
xref:PubMed:25080342 (1)

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Lachesis muta (Viperidae) cDNAs reveal diverging pit viper molecules and scaffolds typical of cobra (Elapidae) venoms: implications for snake toxin repertoire evolution.

Not available

S-EPMC1526512 | biostudies-literature

Evolutionary History and Climatic Correlates of Hypermelanism in Viperidae.

Not available

S-EPMC12000682 | biostudies-literature

VenomMaps: Updated species distribution maps and models for New World pitvipers (Viperidae: Crotalinae).

Not available

S-EPMC9132920 | biostudies-literature

A Review of the Proteomic Profiling of African Viperidae and Elapidae Snake Venoms and Their Antivenom Neutralisation.

Not available

S-EPMC9694588 | biostudies-literature

Next-generation sequencing yields the complete mitochondrial genome of the endangered Milos viper Macrovipera schweizeri (Reptilia, Viperidae).

Not available

S-EPMC7800557 | biostudies-literature

Crystal structure of the complex between venom toxin and serum inhibitor from Viperidae snake.

Not available

S-EPMC6349104 | biostudies-literature

Characterization of a human coagulation factor Xa-binding site on Viperidae snake venom phospholipases A2 by affinity binding studies and molecular bioinformatics.

Not available

S-EPMC2248580 | biostudies-literature

Morphological Plasticity of the Retina of Viperidae Snakes Is Associated With Ontogenetic Changes in Ecology and Behavior.

Not available

S-EPMC8825375 | biostudies-literature

Venom proteomic analysis of two medically important Nigerian viperidae (Echis ocellatus and Bitis arietans) snake species

Hydrophilic interaction liquid chromatography coupled with LC- MS/MS was used to analyze the crude venom extracts of Echis ocellatus (Carpet viper) and Bitis arietans (Puff adder). The gel-free proteomic analysis of the crude venom extracts from E. ocellatus and B. arietans yielded the identificatio...

ORGANISM(S): Echis ocellatus Bitis arietans

2021-03-11 | PXD024638 | Pride

Body size evolution in insular speckled rattlesnakes (Viperidae: Crotalus mitchellii).

Not available

S-EPMC2832004 | biostudies-literature

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152 Results

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