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ProteomicsEASI-tag enables accurate multiplexed and interference-free MS2-based proteome quantification
We developed EASI-tag (Easily Abstractable Sulfoxide-based Isobaric tag), a new generation of amine-derivatizing and sulfoxide-containing isobaric labelling reagents, which dissociate at low collision energy and generate peptide-coupled, interference-free reporter ions with high yield. Efficient iso...
ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2018-06-21 | PXD007165 | Pride
Isobaric labeling Proteomics Mass spectrometry 
ProteomicsBoxCar acquisition method enables single shot proteomics at a depth of 10,000 proteins in 100 minutes
Great advances have been made in sensitivity and acquisition speed on the Orbitrap mass analyzer, enabling increasingly deep proteome coverage. However, these advances have been mainly limited to the MS2 level whereas ion beam sampling for the full MS scan remains extremely inefficient. Here we repo...
ORGANISM(S): Escherichia Coli (ncbitaxon:562) Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2019-10-04 | MSV000084418 | MassIVE
ProteomicsThe Proteome Landscape of the Kingdoms of Life
Proteins preform the vast majority of functions in all biological domains but their large-scale investigation has lagged behind for technological reasons. Since the first essentially complete eukaryotic proteome was reported1, advances in mass spectrometry (MS)-based proteomics2 have enabled increas...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-07-13 | MSV000085728 | MassIVE
ProteomicsThe Proteome Landscape of the Kingdoms of Life
Proteins preform the vast majority of functions in all biological domains but their large-scale investigation has lagged behind for technological reasons. Since the first essentially complete eukaryotic proteome was reported1, advances in mass spectrometry (MS)-based proteomics2 have enabled increas...
ORGANISM(S): Dictyostelium Discoideum (ncbitaxon:44689) Triticum Aestivum (ncbitaxon:4565) Escherichia Coli (ncbitaxon:562) Sus Scrofa Domesticus (ncbitaxon:9825) Gallus Gallus (ncbitaxon:9031) Rattus Norvegicus (ncbitaxon:10116) Homo Sapiens (ncbitaxon:9606) Danio Rerio (ncbitaxon:7955) Saccharomyces Cerevisiae (ncbitaxon:4932) Bos Taurus (ncbitaxon:9913) Drosophila Melanogaster (ncbitaxon:7227) Arabidopsis Thaliana (ncbitaxon:3702) Vitis Vinifera (ncbitaxon:29760) Mus Musculus (ncbitaxon:10090) Caenorhabditis Elegans (ncbitaxon:6239) 
2020-07-10 | MSV000085716 | MassIVE
ProteomicsT.litoralis DSM 5473 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 3.1, Coverage: 12
ORGANISM(S): 523849 
2020-00-00 | 3126980404 | PAXDB
ProteomicsA.muciniphila ATCC BAA-835 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 9.0, Coverage: 65
ORGANISM(S): 349741 
2020-00-00 | 1999420917 | PAXDB
ProteomicsP.distasonis ATCC 8503 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 12.9, Coverage: 52
ORGANISM(S): 435591 
2020-00-00 | 469174560 | PAXDB
ProteomicsC.comes - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 8.8, Coverage: 42
ORGANISM(S): 410072 
2020-00-00 | 1122861391 | PAXDB
ProteomicsB.fragilis NCTC 9343 - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 13.5, Coverage: 50
ORGANISM(S): 272559 
2020-00-00 | 1066200790 | PAXDB
ProteomicsC.aerofaciens - Whole organism, SC (Muelleretal,nature2020)
abundance based on Spectral counting, Interaction consistency score: 8.9, Coverage: 60
ORGANISM(S): 74426 
2020-00-00 | 1833373604 | PAXDB
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