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MetabolomicsMetaboKit: a comprehensive data extraction tool for untargeted metabolomics (Mouse liver assays)

We have developed MetaboKit, a comprehensive software package for compound identification and relative quantification in mass spectrometry-based untargeted metabolomics analysis. In data dependent acquisition (DDA) analysis, MetaboKit constructs a customized spectral library with compound identit...

2021-11-02 | MTBLS1266 | MetaboLights
MetabolomicsMetaboKit: a comprehensive data extraction tool for untargeted metabolomics (Standard mixture assay)

We have developed MetaboKit, a comprehensive software package for compound identification and relative quantification in mass spectrometry-based untargeted metabolomics analysis. In data dependent acquisition (DDA) analysis, MetaboKit constructs a customized spectral library with compound identit...

2021-11-05 | MTBLS1311 | MetaboLights
Metabolomics13C glucose labelling studies using 2D NMR is a useful tool for determining ex vivo whole organ metabolism during hypothermic machine perfusion of kidneys
Background: The aim of this study is to determine the feasibility of using Nuclear Magnetic Resonance (NMR) tracer studies (13C-enriched glucose) to detect ex vivo de novo metabolism in the perfusion fluid and cortical tissue of porcine kidneys during hypothermic machine perfusion (HMP). Methods: Po...
2017-10-16 | MTBLS367 | MetaboLights
UnknownComparative proteome analysis of spontaneous outer membrane vesicles and purified outer membranes of Neisseria meningitidis.
Not available
S-EPMC3807460 | biostudies-literature
UnknownImpact of Moderate Temperature Changes on Neisseria meningitidis Adhesion Phenotypes and Proteome.
Not available
S-EPMC5116725 | biostudies-literature
Unknown(Pro)renin receptor (ATP6AP2) depletion arrests As4.1 cells in the G0/G1 phase thereby increasing formation of primary cilia.
Not available
S-EPMC5487920 | biostudies-literature
ProteomicsBiochemical partitioning of RNA collectives reveals ProQ as a global RNA chaperone in bacteria
The vast number of noncoding RNAs in bacteria suggests that major post-transcriptional circuits beyond those controlled by the global RNA-binding proteins Hfq and CsrA may exist. To identify additional globally acting RNPs we have developed a method (gradient profiling by sequencing; Grad-seq) to pa...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 
2017-07-21 | PXD003360 | Pride
Salmonella enterica Ncrna 
UnknownCellular RNA Targets of Cold Shock Proteins CspC and CspE and Their Importance for Serum Resistance in Septicemic Escherichia coli.
Not available
S-EPMC9426608 | biostudies-literature
ProteomicsEvolution of an outbreak of meningococcal disease among men who have sex with men
Neisseria meningitidis (meningococcus) is usually transmitted via respiratory droplets, whereas its close relative, the gonococcus is sexually transmitted. Invasive meningococcal disease due to isolates of serogroup C increased in Europe and the United States among men who have sex with men (MSM). ...
ORGANISM(S): Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / DSM 15464 / FAM18) 
2016-05-18 | PXD001498 | Pride
Evolution Ania Neisseria meningitidis 
UnknownEvolutionary Events Associated with an Outbreak of Meningococcal Disease in Men Who Have Sex with Men.
Not available
S-EPMC4864352 | biostudies-literature
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