Wachtel M M - OmicsDI

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Unknown (126)
Proteomics (50)
Transcriptomics (3)
Metabolomics (1)

Organisms

Mycobacterium tuberculosis SP7 (43)
Mycobacterium tuberculosis SP10 (43)
Mycobacterium tuberculosis SP13 (43)
Mycobacterium tuberculosis SP22 (43)
Chlamydomonas reinhardtii (43)
Enterococcus mundtii CRL35 (43)
Oncorhynchus tshawytscha (43)
Pseudomonas canadensis (43)
Pseudomonas aeruginosa PAO1H2O (43)
Human alphaherpesvirus 1 strain 17 (43)
Mycobacterium tuberculosis SP1 (43)
Marchantia polymorpha subsp. ruderalis (43)
Methylocystis sp. (43)
Exiguobacterium sp. SH31 (43)
Palaemonetes sp. common grass shrimp associated circular virus (43)
Amaranthus tricolor (43)
Spirochaeta sp. ELBA (43)
Clavibacter nebraskensis NCPPB 2581 (43)
Porites pukoensis (43)
Porphyromonas gingivalis (43)
Leishmania tarentolae (43)
Porphyromonas gingivalis W83 (43)
Human betaherpesvirus 5 (43)
Bothrops insularis (43)
Bothrops jararaca (43)
Bothrops jararacussu (43)
Bothrops cotiara (43)
Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 (43)
Homo sapiens (9)
Pseudomonas aeruginosa (1)

Repository

pride (43)
PeptideAtlas (7)
biostudies-arrayexpress (3)
MetaboLights (1)

Tissue

Others (7)
Cell culture (5)
Seedling (4)
Leaf (4)
Permanent cell line cell (2)
Epithelial cell (2)
Animal (1)
Alveolar sac (1)
Mycelial cord (1)
Motor neuron (1)
Bone (1)
U2-OS cell (1)
Embryonic fibroblast (1)
Embryonic kidney cell line (1)
Cell suspension culture (1)
Plant cell (1)
Breast (1)
Kidney (1)
Whole body (1)
Macrophage (1)

Disease

Alveolar rhabdomyosarcoma (1)
Acute kidney failure (1)
Amyotrophic lateral sclerosis (1)
Osteosarcoma (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (43)
Affinity purification coupled with mass spectrometry proteomics (22)
Shotgun proteomics (16)
Bottom-up proteomics (6)
Mass spectrometry (1)
Gel-based experiment (1)
Data-dependent acquisition (1)

Instrument Platform

LTQ Orbitrap XL (5)
LTQ Orbitrap Elite (2)
Liquid Chromatography MS - alternating (1)
Flow injection analysis MS - positive (1)
Flow injection analysis MS - negative (1)

Publication Date

2022 (13)
2012 (7)
2023 (5)
2024 (4)
2018 (4)
2026 (3)
2025 (3)
2017 (3)
2016 (3)
2021 (2)
2020 (2)
2019 (2)
2007 (1)

UNIPROT ID/AC

O75379 (7)
Q9BXV9 (7)
Q99614 (7)
Q8ND56 (7)
Q08J23 (7)
Q05D32 (7)
P49959 (7)
Q9Y3T9 (7)
P09936 (7)
Q9Y450 (7)
Q9UBT2 (7)
Q9H3N1 (7)
Q92804-2 (7)
Q92804 (7)
Q92499 (7)
Q7Z4V5 (7)
Q15185-4 (7)
Q15185-2 (7)
Q15185 (7)
Q15181 (7)
Q09161 (7)
P84098 (7)
P55209 (7)
Q9Y3Z3 (7)
Q9UNZ2-5 (7)
Q9UNZ2 (7)
Q9NR30 (7)
Q9H1E3 (7)
Q92945 (7)
Q8IYB3 (7)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:62194 (1)
CHEBI:139108 (1)
CHEBI:48681 (1)
CHEBI:28935 (1)
CHEBI:24549 (1)
CHEBI:28599 (1)
CHEBI:104362 (1)
CHEBI:104012 (1)
CHEBI:61958 (1)
CHEBI:71316 (1)
CHEBI:62012 (1)
CHEBI:26900 (1)
CHEBI:63251 (1)
CHEBI:61125 (1)
CHEBI:61191 (1)
CHEBI:143010 (1)
CHEBI:50577 (1)
CHEBI:61508 (1)
CHEBI:68471 (1)
CHEBI:78948 (1)
CHEBI:15509 (1)
CHEBI:35399 (1)
CHEBI:35398 (1)
CHEBI:77358 (1)
CHEBI:104121 (1)
CHEBI:103211 (1)
CHEBI:84805 (1)
CHEBI:61123 (1)
CHEBI:34046 (1)
CHEBI:28131 (1)

Metabolite Name

D-carnitinyl-CoA (1)
Crotonobetainyl-CoA (1)
Adenosine thiamine triphosphate (1)
6-hydroxymethyl-dihydropterin pyrophosphate (1)
Hexadecanoyl-phosphate (n-C16:0) (1)
Ferric 2,3-dihydroxybenzoylserine (1)
Dihydromonapterin (1)
Tetradecenoate (n-C14:1) (1)
L-alanine-L-glutamate (1)
L-alanine-D-glutamate (1)
Cis-3-(3-carboxyethyl)-3,5-cyclohexadiene-1,2-diol (1)
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran (1)
5'-deoxyribose (1)
Octanoate (protein bound) (1)
3-Aminoacrylate (1)
Cyclic pyranopterin monophosphate (1)
L-ascorbate-6-phosphate (1)
Dehydroglycine (1)
Gamma-glutamyl-gamma aminobutyric acid (1)
3-keto-L-gulonate-6-phosphate (1)
2,3-dihydroxycinnamic acid (1)
Cis-3-(3-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol (1)
3-(3-hydroxy-phenyl)propionate (1)
D-Glycero-D-manno-heptose 7-phosphate (1)
Octanoate (n-C8:0) (1)
2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (1)
L-Allo-threonine (1)
Hexadecenoyl-CoA (n-C16:1CoA) (1)
Trans-Hex-2-enoyl-CoA (1)
Hexanoyl-CoA (n-C6:0CoA) (1)

Study type

Transcription profiling by array (2)
RNAi profiling by array (1)

Release Date

2022 (16)
2023 (14)
2021 (14)
2020 (14)
2025 (12)
2024 (12)
2017 (9)
2016 (9)
2019 (6)
2018 (5)
2010 (4)
2012 (3)
2013 (3)
2014 (2)
2009 (2)
2007 (1)
2015 (1)
2011 (1)
2006 (1)

Lab affiliation

Faculty of Biology & Biotechnology Ruhr-University Bochum D-44780 Bochum Germany (2)
Geomicrobiology Center for Applied Geoscience (ZAG) University of Tübingen (1)
University of Tuebingen - Interfaculty Institute of Biochemistry (1)
University of Utah, School of Biological Sciences Salt Lake City, Utah, U.S.A. (1)
Institut für Medizinische Mikrobiologie und Hygiene Elfriede-Aulhorn-Str. 6 72076 Tübingen Germany (1)
Department of Oncology, University Children's Hospital Zurich (1)
University Tübingen, Center for Plant Molecular Biology, Department of Plant Biochemistry, Germany (1)
Eberhard Karls University Tübingen Interfaculty Institute of Microbiology and Infection Medicine (IMIT) (1)
Cellular and Molecular Microbiology Interfaculty Institute of Microbiology and Infection Medicine (IMIT) University of Tübingen Elfriede-Aulhorn-Str. 6 72076 Tübingen, Germany (1)
University Hospital Bonn, Institute of Medical Microbiology, Immunology and Parasitology, Bonn, Germany (1)
Interfaculty Institute for Cell Biology Department of Immunology University of Tübingen Auf der Morgenstelle 15 72076 Tübingen Germany (1)
Department of Oncology, Children’s Hospital Zurich, Steinwiesstrasse 75, 8032 Zurich, Switzerland (1)
Institute of Biochemistry II Goethe University School of Medicine Germany (1)
Junior Research Group Infection Biology of Salmonella Helmholtz Centre for Infection Research Inhoffenstraße 7 38124 Braunschweig Germany (1)
University of Stuttgart, Germany, Institute of Cell Biology and Immunology (1)
Interfaculty Institute of Biochemistry, University of Tübingen, Tübingen, Germany Gene and RNA Therapy Center (GRTC), Faculty of Medicine, University of Tübingen, Tübingen, Germany iFIT Cluster of Excellence (EXC2180) "Image-Guided and Functionally Instructed Tumor Therapies, University of Tübingen, Tübingen, Germany (1)
University of Tübingen Interfaculty Institute of Microbiology and Infection Medicine (IMIT) Section of Cellular and Molecular Microbiology Elfriede-Aulhorn-Str. 6 72076 Tübingen Germany (1)
Universitätsklinikum Münster Klinik für Anästhesiologie, operative Intensivmedizin und Schmerztherapie Vascular Inflammation and Platelets (Gebäude A1) AG Zarbock Albert-Schweitzer-Campus 1 48149 Münster Deutschland (1)
Interfaculty Institute of Microbiology and Infection Medicine, Institute for Medical Microbiology and Hygiene,UKT Tübingen, 72076 Tübingen, Germany. (1)
Comparative Developmental Biology Department of Biological Sciences University of Bergen Norway (1)
Eberhard Karls University Tübingen Faculty of Science, Interfaculty Institute of Cell Biology Auf der Morgenstelle 15 72076 Tübingen Germany (1)
Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark (1)
University of Tübingen, Interfaculty Institute of Microbiology and Infection Medicine (IMIT), Section of Cellular and Molecular Microbiology, Elfriede-Aulhorn-Str. 6, 72076 Tübingen, Germany (1)
Interfakultäres Institut für Mikrobiologie und Infektionsmedizin Tübingen (IMIT) Institut für Medizinische Mikrobiologie und Hygiene Universität Tübingen Tübingen Germany (1)
Faculty of Biology and Biotechnology Ruhr-University Bochum Bochum, 44780, Germany (1)
Center for Plant Molecular Biology (ZMBP) University of Tübingen Tübingen, Germany (1)
Laboratory of Gene Technology (LoGT), Katholieke Universiteit Leuven (KU Leuven) (1)
Faculty of Biology & Biotechnology Ruhr-University Bochum D-44780 Bochum (1)
University of Tuebingen, Interfaculty Institute for Cell Biology, Proteome Center Tuebingen, Auf der Morgenstelle 15, 72076 Tübingen, Germany (1)
Eberhard-Karls-Universität Tübingen, Center of Plant Molecular Biology, Department of Plant Biochemistry, Auf der Morgenstelle 32, D-72076 Tübingen, Germany (1)

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Adult bovine serum (10%) alters the expression of Pseudomonas aeruginosa genes

As production of virulence factors by Pseudomonas aeruginosa is influenced by the host environment, we examined the effect of 10% adult bovine serum (ABS) on the global transcription with P. aeruginoas PAO1 at different phases of growth. At early exponential phase (4 h), serum significantly enhance...

ORGANISM(S): Pseudomonas aeruginosa

2012-07-08 | E-GEOD-30698 | biostudies-arrayexpress

Active Choice Nudge to Increase Screening for Primary Aldosteronism in At-Risk Patients.

Not available

S-EPMC11649442 | biostudies-literature

Conjugated detergent micelles as a platform for IgM purification.

Not available

S-EPMC9325453 | biostudies-literature

Aerosol Plumes of Inhalers Used in COPD.

Not available

S-EPMC10881950 | biostudies-literature

Horizontal Transfer of Bacteriocin Biosynthesis Genes Requires Metabolic Adaptation To Improve Compound Production and Cellular Fitness

Biosynthetic gene clusters (BGCs) encoding the production of bacteriocins are widespread among bacterial isolates and are important genetic determinants of competitive fitness within a given habitat. Staphylococci produce a tremendous diversity of compounds, and the corresponding BGCs are frequen...

2022-11-09 | MTBLS5196 | MetaboLights

Trivalent Dopant Size Influences Electrostrictive Strain in Ceria Solid Solutions.

Not available

S-EPMC8288944 | biostudies-literature

Acetylomics reveals an extensive acetylation diversity within Pseudomonas aeruginosa.

Not available

S-EPMC11512479 | biostudies-literature

Dopant Concentration Controls Quasi-Static Electrostrictive Strain Response of Ceria Ceramics.

Not available

S-EPMC7472436 | biostudies-literature

FliP subcomplex analysis - A flagellum-specific chaperone facilitates assembly of the core type III export apparatus of the bacterial flagellum

Biosynthesis of the bacterial flagellum depends on a flagellar-specific type III secretion system (T3SS), a protein export machine homologous to the export machinery of the virulence-associated injectisome. Six cytoplasmic (FliH/I/J/G/M/N) and seven integral membrane proteins (FlhA/B FliF/O/P/Q/R) f...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium

2017-08-22 | PXD005597 | Pride

Industrial apiculture in the Jordan valley during Biblical times with Anatolian honeybees.

Not available

S-EPMC2895135 | biostudies-literature

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180 Results

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