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ProteomicsVibrio campbellii C/N-limitation
Analyses of Vibrio campbellii CAIM519 under C- and N-limited growth conditions, in both light and dark. Peak Lists are diDO-IPTL analyses; Raw files are unlabeled peptide with 2 synthetic proteorhodopsin standard peptides. See Gallagher & Waldbauer (mSystems) for details.
ORGANISM(S): Vibrio Campbellii Caim 519 = Nbrc 15631 (ncbitaxon:1224742) 
2021-03-25 | MSV000087100 | MassIVE
ProteomicsComamonas KF-1 PET degradation
Cellular and extracellular fractions of Comamonas testosteroni KF-1 grown on PET +/- acetate, labeled via diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry) for protein expression quantitation
ORGANISM(S): Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
MSV000095794 | MassIVE
ProteomicsPseudomonas putida strains on glucose, aromatics & mixtures
Growth of Pseudomonas putida KT2440 and mt2 on glucose, coumarate, ferulate, and glucose+coumarate & glucose+ferulate mixtures. Quantitation by diDO-IPTL (Waldbauer et al. Anal Chem 2017).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) Pseudomonas Putida Group (ncbitaxon:136845) 
2023-04-21 | MSV000091772 | MassIVE
ProteomicsMiddle Island Sinkhole Microbial Mat - Seasonality
Samples from benthic phototrophic microbial mats of Middle Island Sinkhole, Lake Huron, MI, USA. Peptides labeled in vitro for quantitative analysis by diDO-IPTL (Waldbauer et al. 2017 Anal. Chem.).
ORGANISM(S): Microbial Mat Metagenome (ncbitaxon:527640) 
2022-01-20 | MSV000088706 | MassIVE
ProteomicsSynWH7803_DOM
Dissolved organic matter prepared via PPL SPE from cultures of Synechococcus WH7803. Biological triplicate samples were prepared of DOM released via exudation, mechanical lysis, and viral lysis by phage S-SM1.
ORGANISM(S): Synechococcus Sp. Wh 7803 (ncbitaxon:32051) 
2018-01-26 | MSV000081980 | MassIVE
MetabolomicsGNPS - Ostreococcus OlV1/OlV7 lysate DOM
Dissolved organic matter extracts prepared by viral lysates of Ostreococcus lucimarinus CCMP2972, infected by lytic viruses OlV1 and OlV7, as well as uninfected controls, under standard-light (~110uE/m2s; "SL") and low-light (15uE/m2s, "LL") irradiance.
ORGANISM(S): Ostreococcus Lucimarinus Cce9901 (ncbitaxon:436017) Ostreoccus Lucimarinus Virus Olv7 Ostreococcus Lucimarinus Virus 1 (ncbitaxon:880162) 
2019-02-12 | MSV000083434 | GNPS
MetabolomicsChitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle.
Marine picocyanobacteria Prochlorococcus and Synechococcus, the most abundant photosynthetic cells in the oceans, are generally thought to have a primarily single-celled and free-living lifestyle. However, while studying the ability of picocyanobacteria to supplement photosynthetic car...
2024-02-21 | MTBLS5229 | MetaboLights
ProteomicsNitrogen competition and proteome allocation in a surface-ocean microbial community
Dataset from a shipboard incubation experiment of an ocean surface-water microbial community sampled at 25m depth at Station ALOHA in the North Pacific Subtropical Gyre. Incubations were amended with ammonium, glutamate, leucine, nitrate and urea, in two isotopic variants: 15N (to track incorporatio...
ORGANISM(S): Microbial Community From North Pacific Ocean Surface Water 
2022-03-23 | MSV000089118 | MassIVE
ProteomicsSynechococcus WH8102/cyanophage S-SM1 15N incorporation
Dataset showing incorporation of extracellular nitrogen (as 15NO3) into phage proteins during infection of a marine cyanobacterium
ORGANISM(S): Synechococcus Cyanophage S-sm1 (ncbitaxon:382277) Synechococcus Sp. Wh 8102 (ncbitaxon:84588) 
2019-05-20 | MSV000083830 | MassIVE
ProteomicsD. vulgaris WT & DsrC mutants -- respiration & fermentation
diDO-IPTL proteomics data of Desulfovibrio vulgaris Hildenborough wild type and two DsrC point mutants (IPFG07 & IPFG09) under sulfate-reducing (respiration) and fermentative growth (late-exponential phase)
ORGANISM(S): Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882) 
2022-10-27 | MSV000090596 | MassIVE
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