Wallace C C - OmicsDI

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UNIPROT ID/AC

P02741 (4)
P05231 (4)
P08887 (4)

CHEBI ID

CHEBI:15729 (4)
CHEBI:17775 (4)
CHEBI:30769 (4)
CHEBI:15603 (3)
CHEBI:15676 (3)
CHEBI:15891 (3)
CHEBI:15956 (3)
CHEBI:16015 (3)
CHEBI:16235 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16737 (3)
CHEBI:16750 (3)
CHEBI:17084 (3)
CHEBI:17368 (3)
CHEBI:17405 (3)
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CHEBI:18211 (3)
CHEBI:21547 (3)
CHEBI:30887 (3)
CHEBI:33508 (3)
CHEBI:35704 (3)
CHEBI:35932 (3)
CHEBI:52217 (2)

Metabolite Name

Citric acid (3)
Serine (3)
2-Hydroxycinnamic acid (2)
3-Hydroxydodecanedioic acid (2)
3-Hydroxytetradecanedioic acid (2)
4-Pyridoxic acid (2)
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Hippuric acid (2)
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Leucine (2)
Lysine (2)
Methionine (2)
N-acetylcitrulline (2)
Ornithine (2)
Palmitic acid (2)
Phenylalanine (2)
Proline (2)
Pyroglutamic acid (2)
Threonine (2)
Tryptamine (2)
Tyrosine (2)
Undecanedioic acid (2)

IsPrivate

False (5)

First Public Date

2020 (6)

Modelling Approach

Ordinary differential equation model (4)
Constraint-based model (1)

Study type

Transcription profiling by array (47)
RNA-seq of coding RNA (11)
RNA-seq of non coding RNA (3)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
Human - High-throughput sequencing (1)
Methylation profiling by high throughput sequencing (1)

Release Date

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2022 (277)
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2000 (1)
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1998 (1)

Lab affiliation

Children's Hospital of Philadelphia (2)
Duke University (2)
Technische Universität München, Dept. Chemistry, Chair of Biotechnology (2)
Bioanalytical Mass Spectrometry Facility Mark Wainwright Analytical Centre. Room 404B, Lv4 Wallace Wurth Building C27 UNSW Australia www.bmsf.unsw.edu.au Affiliated with: Paleontology, Geobiology and Earth Archives Research Centre (PANGEA) http://www.pangea.unsw.edu.au/ (1)
Biomolecular Measurement Division, National Institute of Standards and Technology (NIST) (1)
Cell Biology Department, Harvard Medical School (1)
Center for Network Systems Biology, Boston University, USA (1)
Dana-Farber Cancer Institute Harvard Medical School (1)
Department of Agronomy and Horticulture, Center for Plant Science Innovation, Beadle Center for Biotechnology, University of Nebraska, Lincoln, NE (1)
Full Professor for Analytical Chemistry Vienna University of Technology Institute of Chemical Technologies and Analytics Getreidemarkt 9/E164 A-1060 Vienna Austria Associate Professor for Biochemistry Medical University of Graz Diagnostic and Research Institute of Pathology Stiftingtalstrasse 24 A-8010 Graz Austria (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstra��e 15, 04318 Leipzig, Germany Phone +49 341 235 4767 nico.jehmlich@ufz.de, www.ufz.de (1)
Institut Curie, Paris Sciences et Lettres Research University, INSERM U934/ CNRS, UMR3215 (1)
Medical Research Council Protein Phosphorylation and Ubiquitylation Unit School of Life Sciences, University of Dundee, Dundee, Scotland (1)
Member, Stanford Cancer Institute (1)
Professor, Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology, Emory University, Atlanta, Georgia, USA (1)
Research unit "Functional proteomics and metabolic pathways", Institute of Pathology, medical University of Graz, Graz, Austria (1)
Roderick O’Sullivan Ph.D., Dept. Pharmacology & Chemical Biology, University of Pittsburgh, UPMC Hillman Cancer Center, 5115 Centre Avenue Pittsburgh, PA 15213, USA (1)
Sunnybrook Research Institute, Toronto, ON, Canada / Department of Biochemistry, University of Toronto, Toronto, ON, Canada / Department of Biochemistry and Molecular Biology, Alberta Children’s Hospital Research Institute, Hotchkiss Brain Institute, University of Calgary, Calgary, AB, Canada / Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada (1)
Technische Universität München Lichtenbergstraße 4 85748 Garching Deutschland (1)
University of Calgary (1)
University of Pittsburgh Department of psychiatry (1)
Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of 6 Technology and Emory University, Atlanta, GA, USA (1)

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Trophoblast-Induced Changes in C-X-C Motif Chemokine 10 Expression Contribute to Vascular Smooth Muscle Cell Dedifferentiation During Spiral Artery Remodeling

Endothelial cell and vascular smooth muscle cell were cocultured in hanging droplets to form spheroids representing an inverted vessel lumen. Control or conditioned media from an extravillous trophoblast (EVT) cell line was incubated with vascular spheroids for 24 hours. Spheroid RNA was then analyz...

ORGANISM(S): Homo sapiens

2013-02-17 | E-MTAB-1462 | biostudies-arrayexpress

Response of Bacillus halodurans C-125 wild-type and OLE-OAP knockout cells to acute ethanol stress

OLE RNA (Ornate, Large, Extremophilic RNA) is a large, noncoding RNA from extremophilic and/or anaerobic Firmicutes that binds to an integral membrane protein (OAP, OLE-Associated Protein) and localizes to the cell membrane. It is highly abundant in cells, and knockouts show increased sensitivity to...

ORGANISM(S): Bacillus halodurans

2012-06-15 | E-GEOD-33303 | biostudies-arrayexpress

Lo7_Hi-C

Secale cereale Lo7 assembly - Hi-C raw data

PRJEB32574 | ENA

Lo7_strictum_Hi-C

Secale cereale Lo7 assembly - additional Hi-C raw data

PRJEB34626 | ENA

The Current Burden of Hepatitis B in the United States: A State, Territorial, and County Modelling Analysis.

Not available

S-EPMC12715829 | biostudies-literature

Fine mapping chromatin contacts in capture Hi-C data.