Walz J J - OmicsDI

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Unknown (316)
Proteomics (39)
Transcriptomics (10)
Metabolomics (5)
Genomics (4)

Organisms

Homo sapiens (36)
Mus musculus (10)
Cytomegalovirus (2)
Drosophila melanogaster (2)
Plasmodium falciparum NF135/5.C10 (1)
ice metagenome (1)

Repository

pride (38)
biostudies-arrayexpress (13)
MetaboLights (5)
MassIVE (1)
ENA (1)

Tissue

Cell culture (11)
Brain (6)
Epithelial cell (6)
Peripheral blood mononuclear cell (6)
Blood (5)
Kidney (5)
Blood plasma (3)
Liver (3)
Lung (3)
Tongue (3)
Adrenal gland (2)
Aorta (2)
B cell (2)
Bladder (2)
Bone marrow (2)
Cerebellum (2)
Colon (2)
Gall bladder (2)
Heart (2)
Muscle (2)
Nephrocyte (2)
Pancreas (2)
Skin (2)
Small intestine (2)
Spleen (2)
Testis (2)
Thyroid gland (2)
Breast (1)
Central nervous system (1)
MRC-5 cell (1)

Disease

Chronic lymphocytic leukemia (4)
Acute myeloid leukemia (2)
Brain glioblastoma multiforme (2)
Cervix carcinoma (2)
Atypical teratoid rhabdoid tumor (1)
Brain cancer (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Colorectal adenocarcinoma (1)
Coronavirus infectious disease (1)
Focal segmental glomerulosclerosis (1)
Head and neck squamous cell carcinoma (1)
Human immunodeficiency virus infectious disease (1)
Non-small cell lung carcinoma (1)
Renal clear cell carcinoma (1)
Skin melanoma (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (19)
Affinity purification coupled with mass spectrometry proteomics (11)
Bottom-up proteomics (6)
Mass spectrometry (4)
Data-dependent acquisition (4)
Immunopeptidomics (4)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Metaproteomics (1)

Instrument Platform

Illumina HiSeq 2500 (2)
5975C Series GC/MSD (Agilent) (2)
Orbitrap Fusion Lumos (1)
6460 Triple Quadrupole LC/MS (Agilent) (1)
Nuclear Magnetic Resonance (NMR) (1)
Pegasus 4D (1)
Q Exactive (1)

Publication Date

2022 (9)
2024 (6)
2021 (6)
2023 (6)
2015 (5)
2026 (5)
2025 (5)
2014 (4)
2018 (4)
2020 (2)
2019 (2)
2012 (1)
2009 (1)
2013 (1)

CHEBI ID

CHEBI:17234 (4)
CHEBI:17822 (4)
CHEBI:18237 (4)
CHEBI:24898 (4)
CHEBI:16199 (3)
CHEBI:16335 (3)
CHEBI:16449 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16750 (3)
CHEBI:16958 (3)
CHEBI:17754 (3)
CHEBI:17992 (3)
CHEBI:18186 (3)
CHEBI:22653 (3)
CHEBI:22660 (3)
CHEBI:25094 (3)
CHEBI:26271 (3)
CHEBI:28044 (3)
CHEBI:28623 (3)
CHEBI:28757 (3)
CHEBI:33508 (3)
CHEBI:78320 (3)
CHEBI:15318 (2)
CHEBI:15428 (2)
CHEBI:15603 (2)
CHEBI:15756 (2)
CHEBI:15887 (2)
CHEBI:15891 (2)
CHEBI:15963 (2)

Metabolite Name

AMP (2)
Campesterol (2)
Glucose (2)
Glycerol (2)
UMP (2)
(R)-3-hydroxybutyrylcarnitine (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-palmitoleoyl-GPC (P-16:0/16:1) (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0) (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0) (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2) (1)
1-(1-enyl-stearoyl)-GPE (P-18:0) (1)
1-Methylnicotinamide (1)
1-arachidonoyl-GPI (20:4) (1)
1-lignoceroyl-GPC (24:0) (1)
1-linolenoyl-GPC (18:3) (1)
1-linoleoyl-2-arachidonoyl-GPC (18:2/20:4n6) (1)
1-linoleoyl-GPC (18:2) (1)
1-linoleoyl-GPI (18:2) (1)
1-methyl-4-imidazoleacetate (1)
1-methyladenosine (1)
1-methylguanidine (1)
1-methylhistamine (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (1)
1-oleoyl-2-docosahexaenoyl-GPC (18:1/22:6) (1)

First Public Date

2020 (1)

Study type

Transcription profiling by array (5)
RNA-seq of coding RNA (5)
ChIP-seq (3)

Release Date

2022 (36)
2025 (34)
2021 (33)
2024 (29)
2023 (27)
2020 (25)
2016 (24)
2019 (19)
2014 (14)
2018 (14)
2017 (14)
2015 (13)
2012 (11)
2013 (7)
2011 (7)
2009 (4)
2008 (4)
2026 (3)
2010 (3)
2007 (2)
2003 (2)
2002 (2)
2006 (1)
2005 (1)

Lab affiliation

Clinical Collaboration Unit Translational Immunology, German Cancer Consortium (DKTK), Department of Internal Medicine, University Hospital Tübingen, Tübingen, Germany (3)
Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, Germany (3)
Department of Peptide-based Immunotherapy, University and University Hospital Tübingen, Tübingen, Germany (3)
Klinik II für Innere Medizin: Nephrologie, Rheumatologie, Diabetologie und Allgemeine Innere Medizin Zentrum für Molekulare Medizin Köln (ZMMK) Uniklinik Köln Kerpener Str. 62 D-50937 Köln (3)
Department of Immunology, Interfaculty Institute for Cell Biology, Eberhard Karls University Tübingen (2)
1) Department II of Internal Medicine and Center for Molecular Medicine Cologne, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany 2) CECAD, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany (1)
1. Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Germany 2. Cluster of Excellence iFIT (EXC2180) “Image-Guided and Functionally Instructed Tumor Therapies”, University of Tübingen, Germany 3. Clinical Collaboration Unit Translational Immunology, Department of Internal Medicine, University Hospital Tübingen, Germany 4. German Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), partner site Tübingen, Germany (1)
Children’s Hospital, University Medical Center Würzburg, Germany (1)
Clinical Collaboration Unit Translational Immunology, University Hospital Tübingen, Tübingen, Germany (1)
Department Molecular Environmental Biotechnology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany, Chair of Geobiotechnology, Technische Universität Berlin, Berlin, Germany (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland T +41 26 300 8631 (1)
Department of Hematology and Oncology, University of Tübingen, Germany (1)
Department of Immunology, Interfaculty Institute for Cell Biology, Tübingen, Germany (1)
Department of Medicine II, Hematology/Oncology, Goethe University, Germany German Cancer Research Center and German Cancer Consortium, Germany (1)
Department of Otorhinolaryngology and Head & Neck Surgery, University Medical Center Ulm, Head and Neck Cancer Center of the Comprehensive Cancer Center Ulm, Ulm, Germany (1)
Department of Peptide-based Immunotherapy, Institute of Immunology, University and University Hospital Tübingen, Tübingen, BW, Germany (1)
Department of Peptide-based Immunotherapy, University and University Hospital Tuebingen, Germany (1)
Department of Peptide-based Immunotherapy, University and University Hospital Tübingen, Tübingen, Germany (lab head) (1)
Dept. of Computer Science, University of Tübingen Germany, Center for Bioinformatics, University of Tübingen, Germany, Quantitative Biology Center, University of Tübingen, Germany, Max Planck Institute for Developmental Biology, Germany, (1)
Division of Proteomics of Stem Cells and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany Heidelberg University, Medical Faculty, Heidelberg, Germany (1)
Institute For Systems Biology (1)
Laboratory of Molecular Neuro-Oncology, Department of Neurology, Clinical Neuroscience Center, University Hospital and University of Zurich, Frauenklinikstrasse 26, 8091 Zurich, Switzerland Department of Neurosurgery, Cantonal Hospital St.Gallen, Rorschacher Strasse 95, 9007 St.Gallen, Switzerland (1)
Neuroimmunology and MS Research Section (NIMS), Neurology Clinic, University of Zurich, University Hospital Zurich, 8091 Zurich, Switzerland (1)
Prof. Dr. Andreas Schlosser Rudolf-Virchow-Zentrum für Experimentelle Biomedizin Universität Würzburg Josef-Schneider-Str. 2 97080 Würzburg Germany (1)
Professor of Molecular Immunology, Wellcome Trust Senior Research Fellow Department of Pathology, University of Cambridge, Tennis Court Road, Cambridge UK, CB2 1QP (1)
Proteomics Care Facilty, Biozentrum, University of Basel, Switzerland (1)
Rudolf Virchow Center, University of Wuerzburg (1)
University of Tübingen Interfaculty Institute for Cell Biology Department of Immunology Auf der Morgenstelle 15 72076 Tuebingen Germany (1)

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Slow-twitch skeletal muscle defects accompany cardiac dysfunction in transgenic mice with a mutation in the myosin regulatory light chain.

Not available

S-EPMC6404564 | biostudies-literature

Rac1 GTPase activates the WAVE regulatory complex through two distinct binding sites.

Not available

S-EPMC5614565 | biostudies-literature

Transcription profiling by array of mouse tissues from different mouse strains to investigate the effects of copy number variation on gene expression

Copy number variation (CNV) of DNA segments has recently been identified as a major source of genetic diversity, but a more comprehensive understanding of the extent and phenotypic effect of this type of variation is only beginning to emerge. In this study we generated genome-wide expression data fr...

ORGANISM(S): Mus musculus

2009-02-28 | E-GEOD-10744 | biostudies-arrayexpress

RNA-Seq of the pituitary gland of mice after 3-week treadmill training versus sedentary control

This study investigates the effects of exercise and genetic predisposition on the transcriptomic profile of the pituitary gland of long-term selected marathon (DUhTP) and non-inbred (DUC) mice. In the exercise group, mice underwent treadmill training for three weeks. For the sedentary control group,...

ORGANISM(S): Mus musculus

2024-11-24 | E-MTAB-12063 | biostudies-arrayexpress

RNA-Seq of the rectus femoris muscle of mice after 3-week treadmill training versus sedentary control

This study investigates the effects of exercise and genetic predisposition on the transcriptomic profile of the rectus femoris muscle of long-term selected marathon (DUhTP) and non-inbred (DUC) mice. All mice used in this experiment were male. In the exercise group, mice underwent treadmill training...

ORGANISM(S): Mus musculus

2024-11-24 | E-MTAB-12072 | biostudies-arrayexpress

A practical guide to long-term field PAM chlorophyll fluorescence measurements: setup, installation, data processing with R package 'LongTermPAM' and interpretation.

Not available

S-EPMC12411321 | biostudies-literature

Physical activity and physical fitness among children and adolescents after the onset of the COVID-19 pandemic in the WHO European Region: a systematic review protocol.

Not available

S-EPMC10514655 | biostudies-literature

How the COVID-19 pandemic and related school closures reduce physical activity among children and adolescents in the WHO European Region: a systematic review and meta-analysis.

Not available

S-EPMC10731871 | biostudies-literature

A Rare De Novo RAI1 Gene Mutation Affecting BDNF-Enhancer-Driven Transcription Activity Associated with Autism and Atypical Smith-Magenis Syndrome Presentation.