Wan Chen C - OmicsDI

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Unknown (2012)
Proteomics (72)
Transcriptomics (34)
Genomics (7)
Metabolomics (6)

Organisms

Chlamydomonas reinhardtii (43)
Pseudomonas canadensis (43)
Marchantia polymorpha subsp. ruderalis (43)
Methylocystis sp. (43)
Exiguobacterium sp. SH31 (43)
Porites pukoensis (43)
Bothrops insularis (43)
Bothrops jararaca (43)
Bothrops jararacussu (43)
Bothrops cotiara (43)
Dinosauria (43)
Homo sapiens (32)
Mus musculus (8)
Arabidopsis thaliana (7)
Saccharomyces cerevisiae (4)
Helicobacter pylori 26695 (2)
Drosophila melanogaster (2)
Arachis hypogaea (1)
Citrus reticulata (1)
Brassica napus (1)
Citrus sinensis (1)
Solanum lycopersicum (1)
Glycine max (1)
Gallus gallus (1)
Nostoc flagelliforme str. Sunitezuoqi (1)
Synechocystis sp. PCC 6803 (1)
Klebsiella pneumoniae JH1 (1)
Cyanobacteriota (1)
Nostoc sp. PCC 7120 = FACHB-418 (1)
Oryctolagus cuniculus (1)

Repository

pride (43)
biostudies-arrayexpress (37)
iProX (23)
MetaboLights (6)
EGA (4)
PAXDB (4)
jPOST (1)
MassIVE (1)

Tissue

Leaf (6)
Cell culture (6)
Melanocyte (3)
Spleen (3)
Nucleus (2)
Germ (2)
Fungal cell (2)
Flower bud (2)
Skin (2)
Lymph node (2)
Brain (2)
Embryo (2)
Whole body (2)
T cell (2)
Sprout (1)
Mammary gland tumor cell (1)
Plantlet (1)
Endosperm (1)
CD8-positive (1)
Seed (1)
Shoot (1)
Plant cell (1)
Macrophage (1)
Heart (1)
HeLa cell (1)
Primary cell (1)

Disease

Melanoma (3)
Fungal infectious disease (1)
Cardiovascular system disease (1)
Breast cancer (1)

Technology Type

Mass Spectrometry (43)
Shotgun proteomics (29)
Mass spectrometry (5)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-dependent acquisition (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000, unknown (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
DiaPASEF (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - negative - reverse phase (5)
NextSeq 550 (1)
Q Exactive HF-X (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2019 (23)
2023 (10)
2014 (9)
2011 (9)
2020 (8)
2015 (7)
2026 (6)
2013 (5)
2025 (5)
2022 (5)
2024 (4)
2021 (4)
2010 (3)
2018 (1)
2012 (1)
2009 (1)
2017 (1)
2016 (1)

UNIPROT ID/AC

A0A2K3CQ35_CHLRE (1)
A0A2K3DEU7_CHLRE (1)
A0A2K3DWB4_CHLRE (1)
A0A2K3DG26_CHLRE (1)
A0A2K3CUR4_CHLRE (1)
A0A2K3D9Z5_CHLRE (1)
A0A2K3D456_CHLRE (1)
A8IL73_CHLRE (1)
A0A2K3DP61_CHLRE (1)
A0A2K3D2N2_CHLRE (1)
A0A2K3D395_CHLRE (1)
A0A2K3DWL9_CHLRE (1)
A0A2K3D677_CHLRE (1)
A8IKV5_CHLRE (1)
A0A2K3CXZ7_CHLRE (1)
A8J9C3_CHLRE (1)
A0A2K3E6T7_CHLRE (1)
A0A2K3DNY2_CHLRE (1)
A8I0Q7_CHLRE (1)
A0A2K3DH84_CHLRE (1)
A0A2K3DDY6_CHLRE (1)
A0A2K3DRS5_CHLRE (1)
A0A2K3CSP1_CHLRE (1)
A0A2K3CZA7_CHLRE (1)
A8HW43_CHLRE (1)
Q9M5D4_CHLRE (1)
A0A2K3DE05_CHLRE (1)
A0A2K3DU66_CHLRE (1)
A0A2K3D9I5_CHLRE (1)
A0A2K3E5N3_CHLRE (1)

CHEBI ID

CHEBI:68566 (2)
CHEBI:125678 (2)
CHEBI:125610 (2)
CHEBI:15765 (2)
CHEBI:21563 (2)
CHEBI:16440 (2)
CHEBI:43029 (2)
CHEBI:16040 (2)
CHEBI:17802 (2)
CHEBI:15956 (2)
CHEBI:17361 (2)
CHEBI:17780 (2)
CHEBI:73067 (2)
CHEBI:18086 (2)
CHEBI:35697 (2)
CHEBI:48981 (2)
CHEBI:73830 (2)
CHEBI:35581 (2)
CHEBI:27823 (2)
CHEBI:18176 (2)
CHEBI:18347 (2)
CHEBI:15891 (2)
CHEBI:17385 (2)
CHEBI:27226 (2)
CHEBI:17597 (2)
CHEBI:15318 (2)
CHEBI:16347 (2)
CHEBI:27897 (2)
CHEBI:17895 (2)
CHEBI:30769 (2)

Metabolite Name

Salicylic acid (3)
Isorhapontigenin (2)
Guanidinoacetate (2)
Epitestosterone glucuronide (2)
3'-Adenylic Acid (2)
Phloretin (2)
Phenyl acetate (2)
Indole-3-acetaldehyde (2)
Uracil (2)
Genistein (2)
Cannabidiolic acid (2)
Dihydrobiopterin (2)
Shikimic acid (2)
Eicosapentaenoic acid (2)
(+/-)12(13)-DiHOME (2)
Caffeic acid (2)
Anacardic acid (2)
Pantothenic acid (2)
Glycerophospho-N-palmitoyl ethanolamine (2)
Palmitoylcarnitine (2)
Indole (2)
Xanthosine (2)
12-Hydroxydodecanoic acid (2)
4-Hydroxybenzaldehyde (2)
Docosahexaenoic acid (2)
Arachidonic acid (2)
Theophylline (2)
Sebacic acid (2)
Cytosine (2)
Palmitic acid (2)

Study type

Transcription profiling by array (25)
ChIP-seq (3)
Methylation profiling by array (2)
RNA-seq of coding RNA (2)
ChIP-chip by tiling array (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
Other (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (333)
2022 (284)
2023 (256)
2024 (251)
2021 (195)
2020 (133)
2019 (102)
2018 (100)
2016 (84)
2015 (66)
2017 (66)
2014 (51)
2026 (43)
2013 (31)
2011 (24)
2012 (11)
2010 (11)
2008 (3)
2009 (2)
2007 (1)
2005 (1)
2000 (1)

Lab affiliation

Molecular Biosciences and the Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX, USA (9)
Molecular Biosciences and the Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX USA (6)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Molecular Biosciences and the Center for Systems and Synthetic Biology, the University of Texas at Austin, Austin, TX, USA (2)
Department of Microbiology and Immunology, Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC 27599, USA (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
Department of Radiation Oncology, Shanghai Proton and Heavy Ion Center, Fudan University Cancer Hospital, China (1)
Molecular Biosciences and Center for Systems and Synthetic Biology, University of Texas at Austin, USA (1)
Tumor Biology and CutaTumor Biology and Cutaneous Oncology Melanoma Center of Excellence Moffitt Cancer Center Tampa, FL, USA (1)
Tumor Biology and Cutaneous Oncology Melanoma Center of Excellence Moffitt Cancer Center Tampa, FL, USA (1)
Molecular Biosciences, and the Center for Systems and Synthetic Biology, University of Texas at Austin, Austin, TX USA (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China. (1)
The Center for Chemical Biology, Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China. (1)
Wang Yiguang lab (1)
California State University Long Beach (1)
Department of Microbiology and Immunology, Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill (1)
CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China (1)
Xiangya Hospital, Central South University (1)
Department of Molecular Biology, Cristea Lab, Princeton University, Princeton, NJ, US (lab head) (1)
China-Japan Union Hospital of Jilin University (1)
Molecular Biosciences and the Center for Systems and Synthetic Biology, the University of Texas at Austin, Austin, TX USA (1)
National Chengdu Center for Safety Evaluation of Drugs, State Key Laboratory of Biotherapy/Collaborative Innovation Center for Biotherapy, West China Hospital, Sichuan University (1)
Division of Cardiology, Department of Medicine; Columbia University, Vagelos College of Physicians and Surgeons, 622 West 168th Street, New York, NY 10032. Department of Pharmacology and Molecular Signaling, Columbia University, Vagelos College of Physicians and Surgeons (1)
Key Laboratory of Brain Functional Genomics of Ministry of Education, Shanghai Key Laboratory of Brain Functional Genomics, and Shanghai Key Laboratory of Regulatory Biology, School of Life Sciences, East China Normal University, Shanghai, 100021, China (1)
Molecular Biosciences, University of Texas at Austin, USA (1)
Department of Cell Biology, Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, China (1)
Tianjin Key Laboratory of Biosensing and Molecular Recognition, Research Center for Analytical Science, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin 300071, China (1)

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Transcriptome profiling reveals a novel role for Trichostatin A in antagonizing histone chaperone Chz1 mediated telomere anti-silencing.

The histone chaperones play an important role in chromatin assembly and disassembly during replication and transcription. We assessed the global roles of histone chaperones in Saccharomyces cerevisiae. Microarray transcriptional analyses indicate that histone chaperones have their own specific targe...

ORGANISM(S): Saccharomyces cerevisiae

2011-06-28 | E-GEOD-30228 | biostudies-arrayexpress

Correlation between C-reactive protein and postoperative mortality in patients undergoing hip fracture surgery: a meta-analysis.

Not available

S-EPMC9996565 | biostudies-literature

Analysis of Research Progress on the Chemical Constituents and Pharmacological Activities of Er-Shiwei Roudoukou Wan.

Not available

S-EPMC12844774 | biostudies-literature

Dual-Resolving of Positional and Geometric Isomerism of C=Cs via Bifunctional Visible-light-activated Photocycloaddition-Photoisomerization Reaction System

The biological functions of lipids largely depend on their chemicalspatial structures. The position and configuration of C=C bonds are two of the essential attributes that determine the structures of unsaturated lipids. However, simultaneous identification of both attributes remains challenging. Her...

ORGANISM(S): Homo Sapiens Arabidopsis Thaliana

2022-02-19 | PXD031819 |

Effect of Vortioxetine on Cognitive Impairment in Patients With Major Depressive Disorder: A Systematic Review and Meta-analysis of Randomized Controlled Trials.

Not available

S-EPMC9743961 | biostudies-literature

Biosafety and Proteome Profiles of Different Heat Inactivation Methods for Mycobacterium tuberculosis.

Not available

S-EPMC8694153 | biostudies-literature

DNA extraction protocol for biological ingredient analysis of Liuwei Dihuang Wan.

Not available

S-EPMC4411345 | biostudies-literature

Guizhi Fuling Wan as a Novel Agent for Intravesical Treatment for Bladder Cancer in a Mouse Model.