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ProteomicsTomato quantitative proteome - Post-transcriptional regulation of fruit ripening and disease resistance in tomato by the vacuolar protease SlVPE3
Identification of protease targets is essential to understand the molecular mechanism by which a protease regulates the biological processes. In this study, we applied an iTRAQ-based quantitative proteomic approach to identify the potential targets of a vacuolar processing enzyme in the cellular con...
ORGANISM(S): Solanum lycopersicum 
2017-02-20 | PXD002980 | Pride
Tomato Lc-ms/ms 
ProteomicsUbiquitinated peptide identification in tomato
In this study, we identified ubiquitinated peptides that changed abundance in the mutant of an E3 ubiquitin ligase gene by coupling a K-(GG) peptide immunoprecipitation with quantitative proteomic analysis. Two independent replicates identified 265 and 236 ubiquitinated peptides, respectively. Seven...
ORGANISM(S): Solanum lycopersicum 
2020-11-24 | PXD018707 | Pride
Swath Fruit Ubiquitinated peptides Tomato 
ProteomicsQuantitative proteome in tomato
In this study, we applied a quantitative proteomic approach to identify the proteins that differentially accumulate in the mutant of an E3 ubiquitin ligase gene. Proteins were isolated from fruits of wild-type and mutant tomato plants. A total of 288 proteins were finally screened as significantly a...
ORGANISM(S): Solanum lycopersicum 
2020-11-24 | PXD018731 | Pride
Fruit Tomato Itraq 
ProteomicsTomato nuclear proteome reveals the involvement of specific E2 ubiquitin-conjugating enzymes in fruit ripening
Fruits are unique to flowering plants and play a central role in seed maturation and dispersal. Molecular dissection of fruit ripening has received considerable interest because of the biological and dietary significance of fruit. To better understand the regulatory mechanisms underlying fruit ripen...
ORGANISM(S): Solanum lycopersicum 
2014-11-18 | PXD001414 | Pride
Nucleus Fruit ripening Proteomics Tomato Mads-rin Ubiquitination 
ProteomicsDeep Multilayer Brain Omics Identifies Molecular Networks in Glioma’s Disease Progression
Risk of high grade gliomas is lower in young females and its incidence enhances after menopause suggesting likely protective roles of female hormones. Little is known about risk factors for adult glioma. Menopause hormone changes have received some attention as a possible risk factor.
ORGANISM(S): Mus Musculus 
2021-12-01 | PXD030195 |
ProteomicsGS2-SUG1 module-mediated control of grain size and weight in rice
SUG1 associates with multiple transcription factors, such as OsBZR1, OsMADS56 and OsSPL13, to control grain size through GA and BR signaling as well as growth pathways.
ORGANISM(S): Oryza Sativa Japonica Group 
2024-05-15 | PXD052270 |
ProteomicsFusobacterium nucleatum Promotes PD-L1 Expression in Macrophages by Inducing Exosomal lncRNA MANCR from Colorectal Cancer Cells
This mass spectrometry dataset was generated from RNA pull-down assays to identify proteins interacting with lncRNA MANCR in colorectal cancer cells (HCT116) and macrophages (THP-1)
ORGANISM(S): Homo Sapiens 
2026-01-04 | PXD072638 |
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