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ProteomicsMass spectrometry-based proteomics of inner ear
To determine whether scISOr-seq isoforms are translated into proteins, we extracted protein samples from the organ of Corti and identified using Mass Spectrometry (MS)-based proteomics.
ORGANISM(S): Mus musculus (Mouse) 
2023-04-23 | PXD031062 | Pride
Inner ear  cochlear 
TranscriptomicsActivation of STAT6 by STING Is Critical for Antiviral Innate Immunity
Analysis of the transcriptional response of HEK293 or HEK293-STAT6 stable cell lines to poly(I:C) transfection. The hypothesis tested was that poly(I:C) transfection is capable of inducing the expression of STAT6-dependent antiviral genes. mRNA isolated from HEK293 or HEK293-STAT6 stable cell lines ...
ORGANISM(S): Homo sapiens 
2011-11-21 | E-GEOD-26435 | biostudies-arrayexpress
UnknownA Meta-Analysis and Systematic Review on the Association between Human Papillomavirus (Types 16 and 18) Infection and Esophageal Cancer Worldwide.
Not available
S-EPMC4943681 | biostudies-literature
ProteomicsProteome of mouse brain and liver tissues
LC-MS/MS analysis for protein quantification of mouse brain and liver tissues
ORGANISM(S): Mus musculus (Mouse) 
2021-05-18 | PXD025201 | Pride
Brain Mouse Liver 
TranscriptomicsA global analysis of QTLs for expression variations in rice shoot at early seedling stage
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. Oligo-nucleotide expression microarrays hybridized with RNA can simultaneously provide data f...
ORGANISM(S): Oryza sativa Indica Group 
2011-06-24 | E-GEOD-22564 | biostudies-arrayexpress
TranscriptomicsA global analysis of QTLs for expression variations in rice flag leaf at heading date
Analyses of QTLs for expression levels (eQTLs) of the genes reveal genetic relationship between expression variation and the regulator, thus unlocking the information for identifying the regulatory network. In this study, we used Affymetrix GeneChip Rice Genome Array to analyze eQTLs in rice flag le...
ORGANISM(S): Oryza sativa 
2014-02-05 | E-GEOD-49020 | biostudies-arrayexpress
MetabolomicsMetabolomic analysis of alfalfa (Medicago sativa L.) root-symbiotic rhizobia responses under alkali stress
Alkaline salts (e.g., NaHCO3 and Na2CO3) causes more severe morphological and physiological damage to plants than neutral salts (e.g., NaCl and Na2SO4) due to differences in pH. The mechanism by which plants respond to alkali stress is not fully understood, especially in plants having symbotic relat...
2018-07-27 | MTBLS481 | MetaboLights
ProteomicsThe Comprehensive Mouse Retina Proteome
A comprehensive mouse retina proteome including six development stages (E13.5, E15.5, P0, P6, and P21, mixed sample).
ORGANISM(S): Mus musculus (Mouse) 
2021-07-11 | PXD023439 | Pride
Retina Mouse Lc-ms/ms 
ProteomicsThe key clock component ZEITLUPE negatively regulates ABA signalling by degradation of the chloroplast outer membrane-localized CHLH/ABAR in Arabidopsis
Firstly, we immunoprecipitated the ZTL protein in ZTL-overexpressing plants (with a YFP tag at the C-terminus of ZTL). Then, the total proteins were identified by MS.
ORGANISM(S): Arabidopsis Thaliana 
2021-10-13 | PXD029110 |
ProteomicsTMT proteomics analysis of cerebrospinal fluid from patients with cerebral venous sinus thrombosis
In the present study, we detected the alterations of the CSF protein spectrum of CVST patients by TMT technique, screen differentially expressed proteins, analyze the functions of these signals through bioinformatics methods, and finally validate the key molecules through parallel reaction monitorin...
ORGANISM(S): Homo Sapiens 
2022-11-22 | PXD038259 |
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