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ProteomicsSmall Extracellular Vesicles derived from four dimensional-culture of mesenchymal stem cells induce alternatively activated macrophages by upregulating IGFBP2/EGFR to attenuate inflammation in the spinal cord injury of rats
Effectively reducing the inflammatory response after spinal cord injury (SCI) is a challenging clinical problem and the subject of active investigation. This study employed a porous scaffold-based three dimensional long-term culture technique to obtain human umbilical cord mesenchymal stem cell (hUC...
ORGANISM(S): Homo sapiens (Human) 
2023-07-20 | PXD040516 | Pride
Spinal cord injury  small extracellular vesicles  four dimensional culture  macrophage polarization  igfbp2/egfr 
MetabolomicsLipidomic profiling reveals distinct differences in plasma lipid composition in healthy, prediabetic and type 2 diabetic individuals

The relationship between dyslipidemia and type 2 diabetes mellitus (T2D) has been extensively reported, but the global lipid profiles, especially in the East Asia population, associated with the development of T2D remain to be characterized. Liquid chromatography coupled to tandem mass spectromet...

2017-04-26 | MTBLS352 | MetaboLights
ProteomicsInduced Resistance Mechanism in Rice against the Rice Seedling Blight Disease by Fluoro-substituted Benzothiadiazole Derivatives and Chitosan oligosaccharide
Seedlings blight is one of the destructive diseases of rice, caused by the fungus Fusarium oxysporum, which impairs rice productions. Fluoro-substituted benzothiadiazole derivatives (FBT) and chitosan oligosaccharide (COS) are elicitors that can enhance plant resistance to pathogen infection. Howeve...
ORGANISM(S): Oryza Sativa 
PXD014979 |
Proteomicstreatment-naïve type 2 diabetics metaproteomics
To gain further insights into functional changes in the gut microbiome associated with T2D, we conducted metaproteomic analyses using iTRAQ (isobaric peptide tags for relative and absolute quantification) and LC-MS/MS-based protocols on 84 samples
ORGANISM(S): Homo sapiens (Human) 
2019-09-11 | PXD013452 | Pride
T2d Itraq Lc-ms/ms 
ProteomicsBasS/BasR two-component system affects the sensitivity of Escherichia coli to class IIa bacteriocins by regulating the tricarboxylic acid cycle
The BasS / BasR two-component system in E. coli affects the sensitivity of E. coli to class IIa bacteriocins by regulating tricarboxylic acid cycle related proteins
ORGANISM(S): Escherichia Coli 
2022-01-06 | PXD030761 |
ProteomicsAntibacterial and Anti-virulence Activity of the Repurposed Agent SX-682 Against Staphylococcus aureus
Proteomics of Staphylococcus aureus SA113 after treatment with SX - 682
ORGANISM(S): Staphylococcus Aureus Subsp. Aureus Nctc 8325 
2025-12-31 | PXD072538 |
ProteomicsProteomics and lipidomics analysis of plasma biomarkers for cervical cancer
This study leverages integrated proteomic and lipidomic analyses on plasma samples from 115 high-grade squamous intraepithelial lesion (HSIL) patients, 133 CC patients, and 88 healthy controls (CT) and develops robust models for effectively predicting HSIL and CC.
ORGANISM(S): Homo Sapiens 
PXD063876 |
Genomicsena-DATASET-DTU-19-07-2017-19:09:46:884-206 - samples
The MHC vcf call set was generated using a modified AsmVar and BayesTyper pipeline. In contrast to the original pipeline, where variant calling is performed using alignment of collapsed assemblies to a reference genome, the MHC call set was produced using alignment of phased MHC haplotypes. Two iter...
EGAD00001003455 | EGA
Genomicsena-DATASET-DTU-20-02-2017-20:47:48:841-649 - samples
Variants on the Y chromosome for 62 danish males in VCF format from the GenomeDenmark Phase 2 cohort. Variants were called using reference based approaches such as the haplotype-caller module from GATK and using alignment of denovo assemblies to the reference using ASMvar.
EGAD00001003186 | EGA
Genomicsena-DATASET-DTU-01-02-2017-10:47:25:397-764 - samples
Alignment of Genome Denmark Phase II dataset to GRCh38. The dataset consists of 150 Danish individuals (50 trios) sequenced to 80X. The BAM-file contains data from multiple libraries created from one individual with libraries of 180, 500, 800, 2000, 5000, 10000 and 20000 bp. The libraries were creat...
EGAD00001003157 | EGA
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