Wang Lien L - OmicsDI

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Transcriptomics (57)
Unknown (50)
Proteomics (5)
Genomics (2)
Metabolomics (2)

Organisms

Mus musculus (37)
Homo sapiens (7)
Gallus gallus (4)
Rattus norvegicus (4)
Helicobacter pylori 26695 (2)
Sus scrofa (2)
Fusarium sinicum (2)
Bos grunniens (1)
Capra hircus (1)
Macaca mulatta (1)
Salmonella enterica subsp. enterica serovar Typhimurium (1)
Gadus morhua (1)

Repository

biostudies-arrayexpress (58)
PAXDB (3)
MetaboLights (2)
EGA (1)
iProX (1)
jPOST (1)

Technology Type

Mass spectrometry (2)

Instrument Platform

Illumina NovaSeq 6000 (5)
BD FACSAria™ III (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Ribo-Zero Gold (Illumina) (1)
Agilent 2100 Bioanalyzer (1)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)

Publication Date

2014 (13)
2012 (9)
2010 (8)
2015 (5)
2008 (4)
2020 (3)
2016 (3)
2026 (2)
2024 (2)
2023 (2)
2019 (2)
2013 (2)
2011 (2)
2009 (2)
2007 (2)
2021 (1)
2017 (1)
2025 (1)
2022 (1)

UNIPROT ID/AC

1433B_HUMAN (2)
1433E_HUMAN (2)
1433F_HUMAN (2)
1433G_HUMAN (2)
1433S_HUMAN (2)
1433T_HUMAN (2)
1433Z_HUMAN (2)
2A5A_HUMAN (2)
2A5B_HUMAN (2)
2A5D_HUMAN (2)
2A5E_HUMAN (2)
2A5G_HUMAN (2)
2AAA_HUMAN (2)
2AAB_HUMAN (2)
2ABA_HUMAN (2)
2ABD_HUMAN (2)
3BHS1_HUMAN (2)
3BHS7_HUMAN (2)
3BP1_HUMAN (2)
3BP5L_HUMAN (2)
3BP5_HUMAN (2)
3HAO_HUMAN (2)
3HIDH_HUMAN (2)
3MG_HUMAN (2)
41_HUMAN (2)
4EBP1_HUMAN (2)
4EBP2_HUMAN (2)
4ET_HUMAN (2)
4F2_HUMAN (2)
5NT1A_HUMAN (2)

CHEBI ID

CHEBI:15956 (1)
CHEBI:16238 (1)
CHEBI:16750 (1)
CHEBI:17431 (1)
CHEBI:18127 (1)

Metabolite Name

FAD (2)
Guanosine (2)
((2-Amino-3-((2-amino-3-((carboxymethyl)amino)-3-oxopropyl)dithio)propanoyl)amino)acetic acid (1)
(+)-2,3-Dihydro-3-methyl-1H-pyrrole (1)
(+)-Acutifolin A (1)
(+)-Erythraline (1)
(+)-Serradiol (1)
(+/-)-(E)-Ethyl-2-[(E)-hydroxyimino]-5-nitro-3-hexeneamide (1)
(+/-)-2,8-Epithio-cis-p-menthane (1)
(-)-Epigallocatechin sulfate (1)
(1-(5-Fluoropentyl)-1H-indol-3-yl)(4-methylnaphthalen-1-yl)methanone (1)
(13Z)-3-Hydroxyicos-13-enoylcarnitine (1)
(17E,19E,21E,23E,25E)-4,6,8,10,12,14,16,27-Octahydroxy-3-(1-hydroxyhexyl)-17,28-dimethyl-1-oxacyclooctacosa-17,19,21,23,25-pentaen-2-one (1)
(1R,2R)-3-oxo-2-pentyl-cyclopentanehexanoic acid (1)
(1S-Endo)-5-(4-Chloro-3-methylphenyl)-1-((4-methylphenyl)methyl)-N-(1,3,3-trimethylbicyclo(2.2.1)hept-2-yl)-1H-pyrazole-3-carboxamide (1)
(1alpha,3beta,20S,22R,24S,25S)-Pubescenin (1)
(2-Methoxyethyl)benzene (1)
(20R)-Ginsenoside Rh2 (1)
(22E)-26,26,26,27,27,27-hexafluoro-25-hydroxy-22,23-didehydrovitamin D3 / (22E)-26,26,26,27,27,27-hexafluoro-25-hydroxy-22,23-didehydrocholecalciferol (1)
(23S,24S)-17,23-Epoxy-24,29-dihydroxy-27-norlanost-8-ene-3,15-dione (1)
(2E)-2-ethylidene-4-hydroxy-5-methyl-3(2H)-furanone (1)
(2R,3S)-Piscidic acid (1)
(2R,4S)-4-Carbamimidamido-3-acetamido-2-((1R,2R)-2-hydroxy-1-methoxy-3-(octanoyloxy)propyl)-3,4-dihydro-2H-pyran-6-carboxylic acid (1)
(2R,6x)-7-Methyl-3-methylene-1,2,6,7-octanetetrol 2-glucoside (1)
(2S)-2-[[(2S)-2-[[(2S)-2-Amino-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoic acid (1)
(2S,3'S)-alpha-Amino-2-carboxy-5-oxo-1-pyrrolidinebutanoic acid (1)
(2S,3R)-2-(4-{2-[(3S,4S)-3,4-Dimethylpyrrolidin-1-YL]ethoxy}phenyl)-3-(4-hydroxyphenyl)-2,3-dihydro-1,4-benzoxathiin-6-OL (1)
(3'-sulfo)Galbeta-Cer(d18:0/20:0(2OH)) (1)
(3R,7R)-1,3,7-Octanetriol (1)
(3R-(3alpha,4alpha(2R*,3R*),5beta,6beta))-5-Methoxy-4-(2-methyl-3-(3-methyl-2-butenyl)oxiranyl)-1-oxaspiro(2.5)octan-6-ol carbamate (1)

Study type

Transcription profiling by array (40)
RNA-seq of coding RNA (8)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
ChIP-chip by tiling array (1)
Animal - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Other (1)
ChIP-seq (1)
Methylation profiling by array (1)

Release Date

2014 (13)
2012 (11)
2021 (10)
2020 (10)
2010 (8)
2016 (7)
2008 (7)
2015 (6)
2022 (6)
2025 (5)
2024 (4)
2026 (3)
2019 (3)
2011 (3)
2009 (3)
2023 (2)
2013 (2)
2007 (2)
2017 (1)
2018 (1)
2003 (1)

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Liensinine can improve vascular remodeling in hypertension through the ferroptosis-related TLR4 inflammatory pathway.

Not available

S-EPMC12743113 | biostudies-literature

RNAseq of coding RNA in the liver, spleen, kidney, abdominal muscle and gonadal adipose tissue of knock out mice and wild type controls as part of the KOMP2 project.

This is a pilot study from the Knockout Mouse Phenotyping Program (KOMP2). The program provides broad, standardized phenotyping of a genome-wide collection of mouse knockouts generated by the International Knockout Mouse Consortium (IKMC), funded by the NIH, European Union, Wellcome Trust, Canada, a...

ORGANISM(S): Mus musculus

2017-12-31 | E-MTAB-4035 | biostudies-arrayexpress

INSPIRE - Investigator-initiated Phase 2 Study of Pembrolizumab Immunological Response in Metastatic Solid Tumors

Whole exome and RNA sequencing source data for: Clouthier, D.L., Lien, S.C., Yang, S.Y.C. et al. An interim report on the investigator-initiated phase 2 study of pembrolizumab immunological response evaluation (INSPIRE). j. immunotherapy cancer 7, 72 (2019). https://doi.org/10.1186/s40425-019-0541-...

EGAS00001003280 | EGA

Protein 2B of Coxsackievirus B3 Induces Autophagy Relying on Its Transmembrane Hydrophobic Sequences.

Not available

S-EPMC4885086 | biostudies-literature

Chemotherapy-refractory diffuse large B-cell lymphoma and indolent B-cell malignancies can be effectively treated with autologous T cells expressing an anti-CD19 chimeric antigen receptor.

Not available

S-EPMC4322257 | biostudies-literature

Gene expression profiles in testis of pigs with extreme high and low levels of androstenone.

Boar taint is a major obstacle when using uncastrated male pigs for swine production. One of the main compounds causing this taint is androstenone, a pheromone produced in porcine testis. Here we use microarrays to study the expression of thousands of genes simultaneously in testis of high and low a...

ORGANISM(S): Sus scrofa

2007-11-26 | E-GEOD-7409 | biostudies-arrayexpress

Single-nucleus RNA-seq (10x Genomics Flex) of wild-type C57BL/6J mouse spleen following Plasmodium berghei ANKA infection, generated as a transcriptome-wide reference for the SpatialBench spatial transcriptomics benchmark

This dataset provides single-nucleus RNA-sequencing (snRNA-seq) profiles of wild-type mouse spleen, generated as a matched, transcriptome-wide reference for the SpatialBench resource benchmarking high-resolution spatial transcriptomics platforms (Visium HD, Xenium and MERSCOPE). Spleens were collect...

ORGANISM(S): Mus musculus

2026-07-07 | E-MTAB-17245 | biostudies-arrayexpress

Low-density miRNA microarray of induced mouse myeloid-derived suppressor cell

Myeloid-derived suppressor cells (MDSCs) are one of the main cell populations that negatively regulate immune responses. However, the mechanism underlying the differentiation and expansion of MDSCs remains unclear. Employing a low-density miRNA microarray and a TaqMan probe-based qRT-PCR assay, we ...

ORGANISM(S): Mus musculus

2014-03-11 | E-GEOD-50914 | biostudies-arrayexpress

Antimicrobial and mechanism of antagonistic activity of Bacillus sp. A2 against pathogenic fungus and bacteria: The implication on honey's regulatory mechanism on host's microbiota.

Not available

S-EPMC7500754 | biostudies-literature

Effects of term infant formulas containing high sn-2 palmitate with and without oligofructose on stool composition, stool characteristics, and bifidogenicity.

Not available

S-EPMC4222706 | biostudies-literature