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ProteomicsApplication of the HCC spectral library in DIA quantitation
This project stores the search results of MaxQuant2.0.3.0 of 162 HCC cell line raw files and 48 raw files for spectral library generation, and search results of DIA-NN version 1.8 and Spectronaut version15.2 of HepG2, HCCLM3 and TGFB1-stimulated HCCLM3.
ORGANISM(S): Homo sapiens (Human) 
2022-11-11 | PXD037159 | Pride
Hcc celllines hepg2 hcclm3 tgfb1 dia 
ProteomicsGeneration of the HCC spectral library covering more than 10,000 protein groups
Peptides of HCC cell lines and tumour tissues were fractionated by Hp-RP to eight fractions and repeated analysed three times by the LC-MS/MS detection system consisted of the EASY-nLC 1000 coupled to the Q-Exactive HF mass spectrometer using data dependent acquisition mode.
ORGANISM(S): Homo sapiens (Human) 
2022-11-11 | PXD035028 | Pride
Hcc proteome 
ProteomicsProteome of Human hepatocellular carcinoma cell lines
The proteomic profiling of nine commonly used HCC cell lines Hep3B, HepG2, HepG2.2.15, HUH7, PLC/PRF/5, MHCC97L,MHCC97H,HCCLM3 and HCCLM6
ORGANISM(S): Homo sapiens (Human) 
2022-11-11 | PXD036643 | Pride
Hepatocellular carcinoma cell lines 
ProteomicsIntegrative analysis of phenotype and testicular quantitative proteome of CKLF-like MARVEL transmembrane domain-containing protein 4 (CMTM4) deficiency mouse reveal its association with male fertility
iTRAQ quantitative proteome of wild and CMTM4 knockout mouse testis tissue.Integrative analysis of phenotype and testicular quantitative proteome of CKLF-like MARVEL transmembrane domain-containing protein 4 (CMTM4) deficiency mouse reveal its association with male fertility.
ORGANISM(S): Mus musculus (Mouse) 
2019-03-18 | PXD011936 | Pride
Cmtm4 itraq 
TranscriptomicsGenome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells
Genome-wide analysis of histone modification (H2AZ, H3K27ac, H3K27me3, H3K36me3, H3K4me1, H3K4me2, H3K4me3 and H3K9me3), protein-DNA binding (TAF1, P300, Pou5f1 and Nanog), cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells We generated histone modification da...
ORGANISM(S): Homo sapiens 
2012-02-28 | E-GEOD-36114 | biostudies-arrayexpress
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