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TranscriptomicsExpression analysis of the glucose deprivation-induced human tumor cell responses
The tumor microenvironment is characterized by low glucose and hypoxia. It is well known that changes in the tumor microenvironment, such as hypoxia and low glucose, can increase the production of VEGF. Although the role of hypoxia in the regulation of VEGF production is well understood, the mechani...
ORGANISM(S): Homo sapiens 
2012-10-25 | E-GEOD-38583 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse skins of embryos lacking Grainyhead-like epithelial transactivator (Get-1)
Defective permeability barrier is an important feature of many skin diseases and causes mortality in premature infants. To investigate the control of barrier formation, we characterized the epidermally expressed Grainyhead-like epithelial transactivator (Get-1)/Grhl3, a conserved mammalian homologue...
ORGANISM(S): Mus musculus 
2007-12-13 | E-GEOD-7381 | biostudies-arrayexpress
TranscriptomicsA rat RNA-Seq transcriptomic Bodymap across eleven organs and four developmental stages
The rat has been used extensively as a model for evaluating chemical toxicities and for understanding drug mechanisms. However, its transcriptome across multiple organs, or developmental stages, has not yet been reported. Here we show, as part of the SEQC consortium efforts, a comprehensive rat tran...
ORGANISM(S): Rattus norvegicus 
2014-02-14 | E-GEOD-53960 | biostudies-arrayexpress
UnknownIntegrative annotation of variants from 1092 humans: application to cancer genomics.
Not available
S-EPMC3947637 | biostudies-literature
UnknownAssessing reproducibility of inherited variants detected with short-read whole genome sequencing.
Not available
S-EPMC8722114 | biostudies-literature
UnknownToward best practice in cancer mutation detection with whole-genome and whole-exome sequencing.
Not available
S-EPMC8506910 | biostudies-literature
UnknownEstablishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing.
Not available
S-EPMC8532138 | biostudies-literature
UnknownCommunity assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.
Not available
S-EPMC6572829 | biostudies-literature
UnknownCross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions.
Not available
S-EPMC8051090 | biostudies-literature
UnknownExtracting the femtometer structure of strange baryons using the vacuum polarization effect.
Not available
S-EPMC11470094 | biostudies-literature
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