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TranscriptomicsThe pattern of gene expression in human CD15+ myeloid progenitor cells
We performed a genome-wide analysis of gene expression in primary human CD151 myeloid progenitor cells. By using the serial analysis of gene expression (SAGE) technique, we obtained quantitative information for the expression of 37,519 unique SAGE-tag sequences. Of these unique tags, (i) 25% were de...
ORGANISM(S): Homo sapiens 
2008-10-03 | E-GEOD-13007 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of hepatocyte-like cells derived from induced pluripotent stem cells (iPSCs) from donors with the Zellweger spectrum of peroxisome biogenesis disorders (PBD-ZSD) and healthy controls
Skin fibroblasts from individuals with PBD-ZSD, a rare autosomal recessive disorder caused by peroxisome assembly defects, show defects in lipid metabolism that provide the basis for clinical diagnostic tests, but are not among the cell types most affected by disease. To explore phenotypes of more c...
ORGANISM(S): Homo sapiens 
2015-05-21 | E-GEOD-69066 | biostudies-arrayexpress
TranscriptomicsThe pattern of gene expression in human CD34(+) stem/progenitor cells
We have analyzed the pattern of gene expression in human primary CD34(+) stem/progenitor cells. We identified 42,399 unique serial analysis of gene expression (SAGE) tags among 106,021 SAGE tags collected from 2.5 x 10(6) CD34(+) cells purified from bone marrow. Of these unique SAGE tags, 21,546 mat...
ORGANISM(S): Homo sapiens 
2005-02-28 | E-GEOD-2346 | biostudies-arrayexpress
ProteomicsLarge-scale phosphoproteome analysis in seedling leaves of Brachypodium distachyon L
In this study, we carried out the first large-scale phosphoproteome analysis of seedling leaves in Brachypodium accession Bd21 using TiO2 microcolumns combined with liquid chromatography-tandem mass spectrometry (LC-MS/MS) and MaxQuant software. A total, 1,470 phosphorylation sites in 950 phosphopro...
ORGANISM(S): Brachypodium distachyon (Purple false brome) (Trachynia distachya) 
2016-07-09 | PXD000868 | Pride
Phosphoproteome Protein kinases Leaf Transcription factors Bd21 Phosphorylation motif 
Transcriptomics2.45 GHz Radiofrequency fields alter gene expression in cultured human cells
The biological effect of radiofrequency (RF) fields remains controversial. We address this issue by examining whether RF fields can cause changes in gene expression. We observed that 221 genes altered their expression after a 2-hour exposure. The number of affected genes increased to 759 after a 6-h...
ORGANISM(S): Homo sapiens 
2005-07-30 | E-GEOD-3025 | biostudies-arrayexpress
UnknownCombination With Low-dose Dextromethorphan Improves the Effect of Amlodipine Monotherapy in Clinical Hypertension: A First-in-human, Concept-proven, Prospective, Dose-escalation, Multicenter Study.
Not available
S-EPMC4998419 | biostudies-literature
Unknown<i>CCR5</i> and <i>CCL5</i> gene expression in colorectal cancer: comprehensive profiling and clinical value.
Not available
S-EPMC10806545 | biostudies-literature
TranscriptomicsDetecting novel low-abundant transcripts in Drosophila
Increasing evidence suggests that low-abundant transcripts may play fundamental roles in biological processes. In an attempt to estimate the prevalence of low-abundant transcripts in eukaryotic genomes, we performed a transcriptome analysis in Drosophila using the SAGE technique. We collected 244,31...
ORGANISM(S): Drosophila melanogaster 
2005-06-03 | E-GEOD-2347 | biostudies-arrayexpress
TranscriptomicsGene Expression Profiles with Common Translocations in Acute Myeloid Leukemia (AML) using SAGE
SAGE was used to profile gene expression in leukemic myeloid progenitor cells of AML patients with t(8;21), t(15;17), t(9;11) and inv(16). Keywords: SAGE analysis of gene expression in leukemic myeloid progenitor cells isolated from bone marrow Bone marrow cells from 4 patients with de novo t(9;11),...
ORGANISM(S): Homo sapiens 
2005-11-30 | E-GEOD-3255 | biostudies-arrayexpress
UnknownDNA Methylation Signature for EZH2 Functionally Classifies Sequence Variants in Three PRC2 Complex Genes.
Not available
S-EPMC7212265 | biostudies-literature
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