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TranscriptomicsSmall RNAs in Chlamydomonas reinhardtii
RNA populations in Chlamydomonas reinhardtii Keywords: Highly parallel pyrosequencing Small RNAs were prepared from Chlamydomonas reinhardtii total extracts,ligated to a 3' adaptor and a 5' acceptor sequentially, and then RT-PCR amplified. PCR products were reamplified using a pair of 454 cloning pr...
ORGANISM(S): Chlamydomonas reinhardtii 
2007-05-15 | E-GEOD-7308 | biostudies-arrayexpress
UnknownScreening of ulcerative colitis biomarkers and potential pathways based on weighted gene co-expression network, machine learning and ceRNA hypothesis.
Not available
S-EPMC9685902 | biostudies-literature
ProteomicsImmune surveillance of brain metastatic cancer cells is mediated by IFITM1 (Proteins identified in the >100 kDa fraction of conditioned media from all four cell lines)
The protein(s) larger than 100 kDa in conditioned medium from lung cancer cell lines activated microglia. The >100 kDa fraction of conditioned medium from H460, H1299, H2030, or H292 cells was collected. Proteins present in the conditioned medium were analyzed by LC-MS/MS.
ORGANISM(S): Homo sapiens (Human) 
2023-02-17 | PXD038129 | Pride
Non-small cell lung cancer Interferon-induced transmembrane protein 1 (ifitm1) Brain metastatic colonization In vivo pooled genome-wide loss-of-function genetic screen 
ProteomicsComparative proteomic analysis of porcine serum between experimental and control groups
This project contains LC-MS/MS-based proteomic data generated from porcine serum samples. Protein identification and quantitative analyses were performed to characterize the serum proteome and investigate differential protein expression among experimental groups.
ORGANISM(S): Sus Scrofa Domesticus 
2026-06-22 | PXD079982 |
MetabolomicsPaeonol Ameliorates Ulcerative Colitis in Mice by Modulating the Gut Microbiota and its Metabolites

BACKGROUND: Ulcerative colitis (UC) is a chronic recurrent inflammatory disease of the gastrointestinal tract. Recent studies demonstrate that the phenolic tannin paeonol (Pae) attenuates UC in mouse models by downregulating inflammatory factors; however, molecular mechanisms lin...

2024-09-27 | MTBLS5204 | MetaboLights
ProteomicsImmune surveillance of brain metastatic cancer cells is mediated by IFITM1 (The coimmunoprecipitated proteins associated with the endogenous membrane IFITM1 of H1299 cells after IFNγ stimulation)
To examine the molecular basis of IFITM1 function, we performed a coimmunoprecipitation (co-IP) assay of cell membrane proteins followed by mass spectrometry analysis.
ORGANISM(S): Homo sapiens (Human) 
2023-02-17 | PXD038130 | Pride
Non-small cell lung cancer Interferon-induced transmembrane protein 1 (ifitm1) Brain metastatic colonization In vivo pooled genome-wide loss-of-function genetic screen 
TranscriptomicsHepatic glycosphingolipid deficiency and liver function in mice
Recent studies have reported that glycosphingolipids (GSL) might be involved in obesity induced insulin resistance. Those reports suggested that inhibition of GSL biosynthesis in animals ameliorated insulin sensitivity accompanied with improved glycemic control leading to decreased liver steatosis i...
ORGANISM(S): Mus musculus 
2010-05-14 | E-GEOD-19316 | biostudies-arrayexpress
UnknownExpansion of human megakaryocyte-biased hematopoietic stem cells by biomimetic Microniche.
Not available
S-EPMC10113370 | biostudies-literature
ProteomicsIdentification of African Swine Fever Virus pS273R (ASFV pS273R) interacting proteins in the cell lysates prepared from the Porcine alveolar macrophages (PAMs) cells by immunoprecipitation coupled with mass spectrometry analysis
Identification of pS273R interacting proteins in cell lysates of PAM cells
ORGANISM(S): Sus Scrofa 
2021-09-19 | PXD028692 |
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