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TranscriptomicsGene expression in ischemic, end-stage failing and non-failing human hearts
A goal of this study was to identify and investigate previously unrecognized components of the remodeling process in the progression to heart failure by comparing gene expression in ischemic, failing (F) to non-failing (NF) hearts. These results also were compared to the changes observed in a prote...
ORGANISM(S): Homo sapiens 
2016-02-08 | E-GEOD-76701 | biostudies-arrayexpress
ProteomicsMudPIT analyses of proteins associated with Piccolo and Bassoon in the presynaptic active zone
We used a 3-step protocol that separates lipid-associated proteins based on their buoyant density, size and charge. All steps were conducted either on ice or at 4C. Step 1 involved a sucrose density gradient centrifugation in which ca. 100 postnatal day 4 rat brains were homogenized in buffer A (5...
ORGANISM(S): Rattus Norvegicus (ncbitaxon:10116) 
2016-07-11 | MSV000079897 | MassIVE
UnknownIdentification of three new 'Candidatus Liberibacter solanacearum' haplotypes in four psyllid species (Hemiptera: Psylloidea).
Not available
S-EPMC9712394 | biostudies-literature
ProteomicsThe histone methyltransferase SETD2 couples transcription and splicing by engaging pre-mRNA processing factors through its SHI domain
The domains of SETD2, a known histone methyltransferase were investigated for specific interaction partners and function using a number of biochemical assays and affinity purification mass spectrometry. The C-terminal domain, named SETD2C, was identified to interact with hnRNP-L through a previousl...
ORGANISM(S): Homo sapiens (Human) 
2021-02-01 | PXD019376 | Pride
Hnrnp Chromatin Complex Mediator Domain 
ProteomicsThe histone methyltransferase SETD2 couples transcription and splicing by engaging pre-mRNA processing factors through its SHI domain
The domains of SETD2, a known histone methyltransferase were investigated for specific interaction partners and function using a number of biochemical assays and affinity purification mass spectrometry. The C-terminal domain, named SETD2C, was identified to interact with hnRNP-L through a previousl...
ORGANISM(S): Homo sapiens (Human) 
2021-02-01 | PXD022946 | Pride
Hnrnp Chromatin Complex Mediator Domain 
TranscriptomicsThe dsRBP and inactive editor, ADR-1, utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome
Purpose: The purpose of this experiment is to expand the repertoire of C. elegans edited transcripts and identify the roles of ADR-1 as indirect regulator of editing and ADR-2 as the only active deaminase in vivo. Methods: Strand-specific RNA sequencing of wild-type and adr mutant worms, followed by...
ORGANISM(S): Caenorhabditis elegans 
2014-01-20 | E-GEOD-51556 | biostudies-arrayexpress
UnknownQuantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors.
Not available
S-EPMC1672612 | biostudies-literature
UnknownDifferential protein expression and basal lamina remodeling in human heart failure.
Not available
S-EPMC5524561 | biostudies-literature
UnknownThe WHHERE coactivator complex is required for retinoic acid-dependent regulation of embryonic symmetry.
Not available
S-EPMC5620087 | biostudies-literature
UnknownTargeted mapping of quantitative trait locus regions for rhizomatousness in chromosome SBI-01 and analysis of overwintering in a Sorghum bicolor × S. propinquum population.
Not available
S-EPMC3538016 | biostudies-literature
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