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GenomicsCfp1 is required for gene expression dependent H3K4me3 and H3K9 acetylation in embryonic stem cells (ChIP-Seq)
Trimethylation of histone H3 lysine 4 (H3K4me3) accumulates at promoters in a gene activity dependant manner. The Set1 complex is responsible for most H3K4me3 in somatic cells and contains the conserved subunit Cfp1, which is implicated in targeting the Set1 complex to CpG islands in mammals. In mou...
ORGANISM(S): Mus musculus 
2014-08-20 | E-GEOD-53490 | biostudies-arrayexpress
ProteomicsTargeted Feature Detection and Extraction
Missed identifications of peptides in data-dependent acquisition (DDA) proteomics experiments is an obstacle n the precise determination of which proteins are present in a sample and their relative abundance. Efforts pular analysis workfl raw data to transfer a pehtiraw identifiher. Another approach...
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2022-03-07 | PXD030706 | Pride
Feature detection Timstof Ion mobility Peptide identification Mass spectrometry 
TranscriptomicsEncyclopedia of C. elegans 3' UTRs and their regulatory elements - 454 sequencing of RACE clones
The 3' untranslated region (3'UTR) constitutes a major site of post-transcriptional regulation of gene expression. Sequence elements in the 3'UTR interact with trans-acting regulators such as microRNAs that affect translation and stability. The overall aim is to use a 3'RACE cloning-sequencing strag...
ORGANISM(S): Caenorhabditis elegans 
2011-01-21 | E-GEOD-26795 | biostudies-arrayexpress
UnknownIn Vitro and In Vivo Evaluation of APX001A/APX001 and Other Gwt1 Inhibitors against Cryptococcus.
Not available
S-EPMC6105804 | biostudies-literature
GenomicsCfp1 is required for gene expression dependent H3K4me3 and H3K9 acetylation in embryonic stem cells
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mus musculus 
2014-08-20 | E-GEOD-53492 | biostudies-arrayexpress
ProteomicsBeta vulgaris (sugarbeet) infected with BNYVV (beet necrotic yellow vein virus)
Herein, proteomic profiling was conducted on susceptible sugarbeet infected with BNYVV to clarify the types of proteins prevalent during compatible virus-host plant interactions. Total protein was extracted from sugarbeet leaf tissue infected with BNYVV (beet necrotic yellow vein virus), quantified...
ORGANISM(S): Beta vulgaris (Sugar beet) 
2014-05-20 | PXD000237 | Pride
Sugarbeet Bnyvv 
UnknownA multiproducer microbiome generates chemical diversity in the marine sponge Mycale hentscheli.
Not available
S-EPMC7196800 | biostudies-literature
UnknownA candidate reference measurement procedure for quantifying serum concentrations of 25-hydroxyvitamin D₃ and 25-hydroxyvitamin D₂ using isotope-dilution liquid chromatography-tandem mass spectrometry.
Not available
S-EPMC4823009 | biostudies-literature
TranscriptomicsExpression data from bovine oocyte; Identification of molecular markers for oocyte competence in bovine cummulus cells
Despite great improvements in assisted reproductive technology (ARTs), the success of in vitro embryo production remains relatively low. Most of the oocytes used to produce in vitro embryos are recovered from smaller follicles, forming a heterogeneous population that must be matured in vitro. Since ...
ORGANISM(S): Bos taurus 
2015-01-27 | E-GEOD-65269 | biostudies-arrayexpress
MetabolomicsTargeting the SREBP-dependent lipidomic reprogramming by virus infection for broad-spectrum therapeutic intervention
Viruses are obligate intracellular parasites that exploit the host metabolic machineries to meet their extraordinary biosynthetic demands. Integrative transcriptomic and lipidomic profiling confirmed that Middle East respiratory syndrome coronavirus (MERS-CoV) infection reprograms the host lipid met...
2018-11-26 | MTBLS762 | MetaboLights
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