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ProteomicsMass Dynamics 1.0: A streamlined, web-based environment for analyzing, sharing and integrating Label-Free Data
Label Free Quantification (LFQ) of shotgun proteomics data is a popular and robust method for the characterization of relative protein abundance between samples. Many analytical pipelines exist for the automation of this analysis and some tools exist for the subsequent representation and inspection ...
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2022-04-13 | PXD028038 | Pride
Maxquant Benchmarking Label-free quantification Web-based software tool Automated data analysis 
TranscriptomicsRNAseq analysis of Campylobacter jejuni exposed to 405nm light
Campylobacter jejuni is susceptible to killing through exposure to blue light (405 nm) due to its poor ability to detoxify reactive oxygen species. This analysis aimed to elucidate the transcriptomic response of Campylobacter jejuni exposed to 405 nm light through illumina sequencing. C. jejuni was ...
ORGANISM(S): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 
2022-07-21 | E-MTAB-11501 | biostudies-arrayexpress
TranscriptomicsRNAseq analysis of Saccharomyces cerevisiae ethanol fermentation with oxygen sparging during the fermentation phase provided by either microbubbles or regular bubbles
Microbubbles are micron-sized bubbles generated using a fluidic oscillator. They have the potential to decrease the cost of biotechnology processes through decreasing the energy required for aeration and mixing. Propagation of yeast cells showed few morphological and transcriptomic changes when cult...
ORGANISM(S): Saccharomyces cerevisiae S288c 
2020-06-30 | E-MTAB-8716 | biostudies-arrayexpress
TranscriptomicsTwo colour microarray of Saccharomyces cerevisiae cultivation and bioethanol production with aeration using microbubbles or regular bubbles
Microbubbles are micron-sized bubbles generated using a fluidic oscillator. They have the potential to decrease the cost of biotechnology processes through decreasing the energy required for aeration and mixing. However, little is known about microbial physiology when grown on microbubbles. This pro...
ORGANISM(S): Saccharomyces cerevisiae 
2020-06-30 | E-MTAB-8696 | biostudies-arrayexpress
MetabolomicsMetabolic analysis of the response of Pseudomonas putida DOT-T1E strains to toluene using Fourier transform infrared spectroscopy and gas chromatography mass spectrometry
To elucidate any observable metabolic alterations during interactions of several strains of Pseudomonas putida (DOT-T1E, and its mutants DOT-T1E-PS28 and DOT-T1E-18) with the aromatic hydrocarbon toluene, metabolomic approaches were employed. Initially, Fourier-transform infrared (FT-IR) spectroscop...
2016-08-23 | MTBLS319 | MetaboLights
UnknownIdentifying disease-specific genes based on their topological significance in protein networks.
Not available
S-EPMC2678983 | biostudies-literature
UnknownMultiwell Assay for the Analysis of Sugar Gut Permeability Markers: Discrimination of Sugar Alcohols with a Fluorescent Probe Array Based on Boronic Acid Appended Viologens.
Not available
S-EPMC5747966 | biostudies-literature
UnknownLength-Dependent Formation of Transmembrane Pores by 310-Helical α-Aminoisobutyric Acid Foldamers.
Not available
S-EPMC4752191 | biostudies-literature
UnknownSwitchable foldamer ion channels with antibacterial activity.
Not available
S-EPMC7481839 | biostudies-literature
UnknownImpact of centre volume, surgeon volume, surgeon experience and geographic location on reoperation after intramedullary nailing of tibial shaft fractures
Not available
S-EPMC8410470 | biostudies-literature
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