Webber E E - OmicsDI

Show results for

Unknown (316)
Transcriptomics (12)
Genomics (6)
Proteomics (6)
Metabolomics (2)

Organisms

Homo sapiens (9)
Pseudomonas aeruginosa PAO1 (3)
Salmonella enterica (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Drosophila melanogaster (2)
Escherichia coli K-12 (1)
Escherichia coli (1)

Repository

biostudies-arrayexpress (18)
pride (4)
MassIVE (2)
MetaboLights (2)

Tissue

Cell culture (3)

Technology Type

Mass Spectrometry (4)
Bottom-up proteomics (3)
Mass spectrometry (2)
Data-dependent acquisition (2)
Affinity proteomics (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (3)
Illumina Genome Analyzer IIx (2)
NextSeq 550 (2)
Q Exactive (2)
Trimmomatic 0.32; Bowtie 2.2.3 (1)
NextSeq 500 (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)

Publication Date

2009 (3)
2026 (3)
2024 (2)
2022 (2)
2020 (2)
2017 (2)
2014 (2)
2013 (2)
2025 (1)
2019 (1)
2015 (1)
2012 (1)
2010 (1)
2008 (1)
2016 (1)
2023 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15414 (2)
CHEBI:15741 (2)
CHEBI:16335 (2)
CHEBI:16530 (2)
CHEBI:16610 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:16765 (2)
CHEBI:16856 (2)
CHEBI:16865 (2)
CHEBI:17148 (2)
CHEBI:17509 (2)
CHEBI:17533 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17748 (2)
CHEBI:17992 (2)
CHEBI:18012 (2)
CHEBI:18026 (2)
CHEBI:18123 (2)
CHEBI:27732 (2)
CHEBI:28865 (2)
CHEBI:30753 (2)
CHEBI:30754 (2)
CHEBI:30763 (2)
CHEBI:30769 (2)
CHEBI:30860 (2)
CHEBI:35932 (2)
CHEBI:6650 (2)

Metabolite Name

(+)-14-methyl palmitic acid (1)
(+)-18-methyl-eicosanoic acid (1)
(+)-3-hydroxy behenic (1)
(+)-7-Isomethyljasmonate (1)
(+)-Borneol (1)
(+)-Isomenthone (1)
(+)-Isostearic acid (1)
(+)-Linalool (1)
(+)-Menthone (1)
(+)-N-Methylconiine (1)
(+)-Pronuciferine (1)
(+)-Quercitol (1)
(+)-Sceletium A4 (1)
(+)-abscisate (1)
(+)-gamma-Hydroxy-L-homoarginine (1)
(+)-trans-Piperitenol (1)
(+)-trans-Pulegol (1)
(+-)-Carnegine (1)
(+/-)-6-Hydroxy-3-oxo-alpha-ionol (1)
(+/-)-Homochelidonine (1)
(-)-5-(3,4,5-trihydroxyphenyl)-gamma-valerolactone (1)
(-)-Abscisic acid (1)
(-)-Acanthocarpan (1)
(-)-Borneol (1)
(-)-Hygrine (1)
(-)-Hygroline (1)
(-)-Linalool (1)
(-)-Menthone (1)
(-)-Quebrachitol (1)
(-)-Sedamine (1)

Study type

Transcription profiling by array (7)
ChIP-seq (4)
DNA-seq (2)
ChIP-chip by tiling array (1)
High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
ATAC-seq (1)
Methylation profiling by array (1)

Release Date

2024 (50)
2023 (42)
2025 (40)
2022 (34)
2021 (30)
2020 (22)
2018 (21)
2019 (17)
2014 (11)
2015 (10)
2013 (10)
2017 (7)
2011 (7)
2009 (6)
2026 (6)
2016 (6)
2012 (5)
2010 (4)
2008 (3)
2005 (1)
2004 (1)
2001 (1)

Lab affiliation

Department of Pharmacy and Biotechnology - University of Bologna (1)
Group Leader Dept Molecular Microbiology John Innes Centre Norwich, UK (1)
John Innes Centre Molecular Microbiology Norwich, UK (1)
John Innes Centre Molecular Microbiology Nurwich, UK (1)

Previous page
1 / 35
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 35
Next page

Sort by:

Relevance

Page size

The transcriptomic response of E. coli to triclosan exposure

The gene expression profile of E. coli K-12 MG1655 grown in minimal medium treated with 0.12 mg/L of the biocide triclosan has been analysed using whole genome oligonucleotide microarrays. "Control" RNA was isolated from three independently grown 50ml MOPS minimal media cultures of E. coli K-12 MG16...

ORGANISM(S): Escherichia coli

2010-10-08 | E-GEOD-15059 | biostudies-arrayexpress

Whole genome TraDIS-Xpress assay to determine gene roles during growth of E. coli in different concentrations of the beta-lactam antibiotic meropenem

The aim of the experiment was to assay every gene in the E. coli genome to identify those that contribute to increased or decreased susceptibility to the beta-lactam antibiotic meropenem. A library of transposon-insertion mutants was grown overnight in the presence or absence of a range of concentra...

ORGANISM(S): Escherichia coli K-12

2022-06-09 | E-MTAB-11802 | biostudies-arrayexpress

Whole genome \"TraDIS-Xpress\" assay to determine gene roles during growth of E. coli in different concentrations of the antibiotics trimethoprim and sulfamethoxazole

To assay every gene in the E. coli genome to identify those that contribute to increased or decreased susceptibility to the antibiotics trimethoprim and sulfamethoxazole. This will help to define more accurately those bacterial cell mechanisms that contribute to these phenomena and provide informat...

ORGANISM(S): Escherichia coli str. K-12 substr. MG1655

2020-10-19 | E-MTAB-9305 | biostudies-arrayexpress

Hypoxic niches are endowed with a protumorigenic mechanism that supersedes the protective function of PTEN.

Not available

S-EPMC6894060 | biostudies-literature

Colorectal surgeon physical pain and conditioning: a national survey.

Not available

S-EPMC11818781 | biostudies-literature

Transcription profiling of Salmonella enterica serovar Typhimurium to investigate the disruption of tolC on the transcriptome

Analysis of the effect of disruption of tolC on the transcriptome of Salmonella enterica serovar Typhimurium

ORGANISM(S): Salmonella typhimurium

2009-06-03 | E-MEXP-1982 | biostudies-arrayexpress