Wei W W - OmicsDI

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Unknown (14825)
Proteomics (916)
Transcriptomics (912)
Genomics (180)
Metabolomics (75)
Multiomics (10)
Other (4)
Models (3)
Genomic (1)

Organisms

Homo sapiens (766)
Mus musculus (381)
Rattus norvegicus (45)
Arabidopsis thaliana (39)
Caenorhabditis elegans (36)
Saccharomyces cerevisiae (22)
Streptomyces coelicolor (17)
Drosophila melanogaster (17)
Oryza sativa (14)
Glycine max (11)
Zea mays (9)
Triticum aestivum (9)
Staphylococcus aureus (9)
Oryza sativa Japonica Group (7)
Ovis aries (6)
Macaca mulatta (6)
Tetrahymena thermophila (5)
Sus scrofa (5)
Bombyx mori (5)
Moraxella catarrhalis (4)
Bacillus subtilis subsp. subtilis str. 168 (4)
Brassica napus (4)
Campylobacter jejuni (4)
Danio rerio (4)
Pseudomonas aeruginosa PAO1 (4)
Dreissena polymorpha (3)
Gossypium hirsutum (3)
Yersinia pestis (3)
Oryza sativa Indica Group (3)
Cryptococcus neoformans (3)

Repository

biostudies-arrayexpress (1043)
iProX (423)
pride (364)
MetaboLights (70)
PeptideAtlas (70)
EGA (50)
MassIVE (42)
jPOST (13)
GNPS (5)
GPMDB (4)
BioModels (3)
PAXDB (2)
dbGaP (1)
PanoramaPublic (1)

Tissue

Cell culture (95)
Liver (44)
Epithelial cell (41)
Brain (31)
Liver (17)
Leaf (16)
Whole body (15)
Permanent cell line cell (14)
Plant cell (12)
Blood plasma (8)
Stem cell (8)
Heart (7)
Testis (7)
Lung (7)
Others (6)
Macrophage (6)
Blood serum (6)
Colon (5)
Mesenchymal cell (4)
HeLa cell (4)
B cell (4)
Blood (4)
Seedling (3)
Flower (3)
Early embryonic cell (3)
Cell suspension culture (3)
Root (3)
Male Reproductive System (2)
Plasma Non-glyco (2)
Urine (1)

Disease

Prostate adenocarcinoma (12)
Breast cancer (10)
Disease free (10)
Colon cancer (8)
Cardiovascular system disease (5)
Brain cancer (5)
Alzheimer's disease (5)
Not Available (4)
Acute leukemia (4)
Lung cancer (3)
Glioblastoma (3)
Normal (2)
Temporal lobe epilepsy (2)
Thyroid cancer (2)
Abnormality of prenatal development or birth (2)
Brain ischemia (2)
Cervix carcinoma (2)
Parkinson's disease (2)
Influenza (2)
Renal cell carcinoma (2)
Adenocaricinoma (1)
Primary acute lymphoblastic leukemia (1)
Amyotrophic lateral sclerosis (1)
Normotensive (1)
Kaposi's sarcoma (1)
AIDS-KS, HIV+, nodular (late) stage (1)
SS2-infected (1)
Psoriasis (1)
Papillary thyroid carcinoma (1)
Invasive ductal carcinoma (1)

Technology Type

Mass Spectrometry (364)
Shotgun proteomics (193)
Bottom-up proteomics (63)
Mass spectrometry (52)
Gel-based experiment (32)
Affinity purification coupled with mass spectrometry proteomics (30)
Data-dependent acquisition (29)
Data-independent acquisition (17)
Top-down proteomics (16)
Mass spectrometry assay (12)
SWATH MS (8)
NMR spectroscopy (6)
Chemical cross-linking coupled with mass spectrometry proteomics (6)
SRM/MRM (5)
Mass spectrometry imaging (3)
MSE (3)
Illumina HiSeq 2000 (2)
Proteogenomics (2)
All-ion fragmentation (2)
DiaPASEF (2)
Illumina HiSeq 2500, ILLUMINA (1)
ILLUMINA, Illumina HiSeq 2500 (1)
AB SOLiD System 3.0 (1)
RNA mass spectrometry (1)

Instrument Platform

Illumina NovaSeq 6000 (29)
Illumina HiSeq 2000 (17)
Illumina HiSeq 2500 (13)
NextSeq 500 (8)
Q Exactive HF (7)
Orbitrap Fusion Lumos (7)
Illumina HiSeq 3000 (5)
MA900, Sony (2)
10x Chromium Controller (2)
RiboZero (2)
Trizol (Invitrogen); FastPrep (MP Biochemicals) (2)
DASGIP bioreactors (2)
Ion Torrent Proton (2)
HiSeq X Ten (2)
Illumina HiSeq 4000 (2)
TripleTOF 6600 (2)
Agilent 2100 bioanalyzer (1)
NanoDrop ND-1000 (1)
Affymetrix Genechip Command Console software (1)
Trizol Reagent (1)
Covaris E220evolution (1)
AB SOLiD 4 System (1)
ScanArray 4000XL [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
Illumina NovaSeq X (1)
Illumina HiSeq X (1)
DNBSEQ-T7 (1)
MinION (1)

Publication Date

2014 (179)
2012 (140)
2013 (139)
2011 (136)
2022 (126)
2021 (122)
2015 (113)
2010 (98)
2025 (97)
2024 (90)
2016 (90)
2020 (86)
2023 (69)
2026 (62)
2008 (50)
2019 (44)
2017 (37)
2009 (36)
2018 (30)
2007 (18)
2006 (7)
2005 (5)
2004 (4)
2003 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

I1JBY6_SOYBN (2)
I1MV75_SOYBN (2)
K7MRI2_SOYBN (2)
I1N7R4_SOYBN (2)
C6SYN9_SOYBN (2)
I1NE48_SOYBN (2)
K7LQ39_SOYBN (2)
I1N4T4_SOYBN (2)
I1JZ11_SOYBN (2)
I1LKT4_SOYBN (2)
I1K5F3_SOYBN (2)
K7M2N6_SOYBN (2)
K7MNY8_SOYBN (2)
I1LDH1_SOYBN (2)
RR11_SOYBN (2)
I1J4K5_SOYBN (2)
I1L481_SOYBN (2)
K7KVV5_SOYBN (2)
K7MH54_SOYBN (2)
K7LP44_SOYBN (2)
C6T5D5_SOYBN (2)
I1NAU6_SOYBN (2)
K7K663_SOYBN (2)
K7L2L5_SOYBN (2)
K7MF33_SOYBN (2)
K7LG05_SOYBN (2)
I1MVR8_SOYBN (2)
K7L5C6_SOYBN (2)
I1JA87_SOYBN (2)
I1KCC4_SOYBN (2)

ENSEMBL ID

ENSG00000170477 (10)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (25)
CHEBI:30769 (24)
CHEBI:17568 (21)
CHEBI:17895 (21)
CHEBI:17295 (21)
CHEBI:16015 (20)
CHEBI:15741 (19)
CHEBI:15891 (19)
CHEBI:16704 (19)
CHEBI:15428 (18)
CHEBI:17154 (18)
CHEBI:18012 (18)
CHEBI:32816 (18)
CHEBI:15756 (18)
CHEBI:17533 (17)
CHEBI:30746 (17)
CHEBI:16335 (17)
CHEBI:17203 (17)
CHEBI:30915 (17)
CHEBI:16919 (17)
CHEBI:16865 (16)
CHEBI:16467 (16)
CHEBI:18050 (16)
CHEBI:16359 (16)
CHEBI:17053 (16)
CHEBI:16755 (15)
CHEBI:18257 (15)
CHEBI:16708 (15)
CHEBI:28842 (15)
CHEBI:16958 (15)

Metabolite Name

Hypoxanthine (19)
L-Tyrosine (18)
L-Proline (15)
Taurine (14)
Xanthine (14)
L-Phenylalanine (14)
Uracil (13)
L-Histidine (13)
Adenosine (13)
Uridine (13)
Citric acid (12)
Glycine (11)
L-Arginine (11)
Stearic acid (11)
Guanine (11)
L-Glutamine (11)
L-Serine (11)
Guanosine (11)
L-Leucine (11)
L-Methionine (11)
Nicotinic acid (10)
Ornithine (10)
Benzoic acid (10)
Suberic acid (10)
L-Glutamate (10)
Adenine (10)
Thymidine (10)
Creatinine (10)
L-Isoleucine (10)
L-Alanine (9)

IsPrivate

False (3)

Model Flag

Non Kinetic (1)

Modelling Approach

Ordinary differential equation model (2)
Constraint-based model (1)

Modification

6x(2)H labeled dimethylated L-arginine (1)
N6 (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
Not available (1)

Study type

Transcription profiling by array (560)
RNA-seq of coding RNA (171)
ChIP-seq (107)
RNA-seq of non coding RNA (48)
Comparative genomic hybridization by array (26)
Methylation profiling by high throughput sequencing (23)
Methylation profiling by array (20)
RNA-seq of coding RNA from single cells (16)
Transcription profiling by RT-PCR (11)
ChIP-chip by tiling array (10)
Other (10)
Unknown experiment type (5)
Transcription profiling by tiling array (5)
Genotyping by array (5)
Animal - High-throughput sequencing (4)
ATAC-seq (4)
MicroRNA profiling by array (4)
Transcription profiling by SAGE (2)
Plant - High-throughput sequencing (2)
High-throughput sequencing (2)
ChIP-chip by array (2)
Transcription profiling by MPSS (1)
MNase-seq (1)
MeDIP-seq (1)
Cell line - One-color microarray (1)
Proteomic profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (2334)
2022 (2017)
2023 (1927)
2024 (1873)
2021 (1519)
2020 (1127)
2019 (853)
2018 (686)
2017 (576)
2016 (541)
2015 (452)
2014 (430)
2026 (335)
2013 (316)
2012 (269)
2011 (221)
2010 (153)
2008 (83)
2009 (73)
2007 (30)
2006 (19)
2005 (13)
2004 (9)
2003 (6)
2002 (2)
2001 (2)
2000 (1)

Lab affiliation

National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (10)
Cedars-Sinai Medical Center (5)
University of Alabama at Birmingham, O'Neal Mass Spectrometry Proteomics Shared Facility (4)
Tianjin Medical University General Hospital (4)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (4)
The Second Hospital of Dalian Medical University (4)
BGI Research (3)
Shandong Normal University (3)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China (3)
College of Biology, Hunan University, China (3)
Huazhong Agricultural University (3)
Departments of Surgery and Biomedical Sciences Cedars-Sinai Medical Center Los Angeles, CA 90048 (3)
Shanghai Tenth People's Hospital, Tongji University School of Medicine (2)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology (2)
Department of Pathology and Cell Biology and Institute for Cancer Genetics Herbert Irving Comprehensive Cancer Vagelos College of Physicians & Surgeons Columbia University (2)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
The University of Texas MD Anderson Cancer Center (MDACC), Houston, TX 77030, USA (2)
State Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China. (2)
Department of Surgery, University of Michigan Medical School, Ann Arbor, MI, USA (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
School of Engineering, Westlake University (2)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Penn State College of Medicine, Hershey, PA, USA (2)
Department of Dental Implant Center, Beijing Stomatological Hospital, School of Stomatology, Capital Medical University, Beijing, China (2)
Institute of Basic Medical Sciences, School of Basic Medicine, Peking Union Medical College; No. 5 Dongdansantiao, Dongcheng District, Beijing 100005, China (2)
Shenzhen People’s Hospital (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)

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Expression data from silkworm posterior silk glands at the late larval stages

The silkworm silk gland is one of the most efficient protein synthesis systems among all organisms. Its amazingly efficient protein synthesis makes the silk gland a desirable object for basic studies on gene expression and regulation and for biotechnological applications. At the early stages of the ...

ORGANISM(S): Bombyx mori

2012-12-05 | E-GEOD-26172 | biostudies-arrayexpress

Effect of Sirolimus treatment on lupus nephritis in NZB/W F1 female mice

NZB/WF1 female mice spontaneously develop autoimmune lupus nephritis. Expression profiling of kidney tissue from (a) 12 week NZB/W F1 female mice defined as asymptomatic for lupus nephritis, (b) 36 and 42 week NZB/W F1 female mice defined as diseased/symptomatic for lupus nephritis and (c) 36 and 42...

ORGANISM(S): Mus musculus

2008-11-20 | E-GEOD-12024 | biostudies-arrayexpress

Chinese giant salamander Bcl-w: An inhibitory role in iridovirus-induced mitochondrial apoptosis and virus replication.

Not available

S-EPMC10445403 | biostudies-literature

Definition of the M-OM-^C(W) Regulon of Bacillus subtilis in the Absence of Stress

Comprison of the transcriptome of wild type Bacillus subtilis to the mutants sigW, rasP and prsW to select all candidate sigW regulated genes. We identified 89 genes as being sigW regulated, including several non-coding RNA's. The effects of rasP and prsW mutations on sigW regulated genes were relat...

ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168

2013-01-02 | E-GEOD-35236 | biostudies-arrayexpress

Whole genome analysis and cold adaptation strategies of Pseudomonas sivasensis W-6 isolated from the Napahai plateau wetland.

Not available

S-EPMC10468529 | biostudies-literature

Efficient short time pretreatment on lignocellulosic waste using an isolated fungus Trametes sp. W-4 for the enhancement of biogas production.

Not available

S-EPMC10025918 | biostudies-literature

Thermal migration towards constructing W-W dual-sites for boosted alkaline hydrogen evolution reaction.

Not available

S-EPMC8828749 | biostudies-literature

Microsecond-Scale Transient Thermal Sensing Enabled by Flexible Mo_1-xW_xS₂ Alloys.

Not available

S-EPMC11337116 | biostudies-literature

Global Mapping of Histone H3 K4 and K27 Trimethylation: Lineage Fate Determination of Differentiating CD4+ T Cells

Multipotential naïve CD4+ T cells differentiate into distinct lineages including Th1, Th2, Th17, and inducible T regulatory (iTreg) cells. The remarkable diversity of CD4+ T cells begs the question whether the observed changes reflect terminal differentiation with heritable epigenetic modifications ...

ORGANISM(S): Mus musculus

2009-01-21 | E-GEOD-14254 | biostudies-arrayexpress

Preliminary assessment of the therapeutic potential of staphylococcal enterotoxin-like W via biological activity and TCR binding sites analysis.

Not available

S-EPMC12407819 | biostudies-literature

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16916 Results

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