West John J - OmicsDI

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Transcriptomics (10)
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Metabolomics (4)
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Genomic (1)

Organisms

Homo sapiens (9)
Oryza sativa (2)
Vairimorpha ceranae (2)
unclassified Actinopterygii (2)
Vairimorpha apis (2)
Chlamydomonas reinhardtii CC3269 (2)
Paenibacillus amylolyticus (2)
Oecophyllibacter saccharovorans (2)
Elizabethkingia anophelis (2)
Plasmodium yoelii yoelii 17XNL (2)
Macaca fascicularis fascicularis (2)
Equidae (2)
Formica sp. BOLD:AAA1469 (2)
Santalum album (2)
Phytophthora cactorum (2)
Cyperus esculentus var. sativus (2)
Elephas maximus maximus (2)
NEWT:298176 (2)
Stenotrophomonas rhizophila (2)
Colwellia psychrerythraea 34H (2)
Pseudomonas aeruginosa PABL056 (2)
Balneola vulgaris (2)
Lactobacillus delbrueckii subsp. bulgaricus CNCM I-1632 (2)
Fructilactobacillus sanfranciscensis DSM 20451 (2)
Deinococcus proteolyticus MRP (2)
Populus x canadensis (1)
Salmo salar (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (11)
EGA (5)
MetaboLights (4)
pride (2)
dbGaP (1)
ENA (1)

Tissue

Microglial cell (1)
Epithelial cell (1)

Disease

Cell type cancer (1)

Technology Type

Mass spectrometry (4)
Mass Spectrometry (2)
Bottom-up proteomics (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Direct infusion MS - positive (1)
Q Exactive (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2011 (3)
2012 (2)
2009 (2)
2025 (2)
2016 (1)
2010 (1)
2008 (1)
2006 (1)
2024 (1)
2023 (1)
2022 (1)
2019 (1)

CHEBI ID

CHEBI:84415 (2)
CHEBI:35932 (2)
CHEBI:27732 (2)
CHEBI:16450 (2)
CHEBI:48928 (2)
CHEBI:18107 (2)
CHEBI:16750 (2)
CHEBI:17172 (2)
CHEBI:16704 (2)
CHEBI:17748 (2)
CHEBI:15698 (2)
CHEBI:18211 (2)
CHEBI:16765 (2)
CHEBI:16811 (2)
CHEBI:16610 (2)
CHEBI:22653 (2)
CHEBI:24898 (2)
CHEBI:26986 (2)
CHEBI:27266 (2)
CHEBI:17822 (2)
CHEBI:17568 (2)
CHEBI:15611 (2)
CHEBI:16742 (2)
CHEBI:48430 (2)
CHEBI:16530 (2)
CHEBI:17368 (2)
CHEBI:18295 (2)
CHEBI:26271 (2)
CHEBI:28044 (2)
CHEBI:17256 (2)

Metabolite Name

Dihydroxyacetone phosphate (2)
Cholesterol (2)
Thymidine (2)
Xanthosine (2)
Taurine (2)
Inosine (2)
Uridine (2)
Uridine 3'-monophosphate (1)
Sphingomyelin (d18:2/24:1, d18:1/24:2) (1)
Sphingomyelin (d18:2/16:0, d18:1/16:1) (1)
Myristoyl sulfate (1)
Dehydroisoandrosterone sulfate (1)
Cytidine 3'-monophosphate (1)
Anatabine (1)
2-hydroxyoleic acid (1)
13-methylmyristate (1)
Guanosine 2'-monophosphate (2'-GMP) (1)
Pimelate (heptanedioate) (1)
Oxidized glutathione (GSSG) (1)
Reduced glutathione (GSH) (1)
Isobar: fructose 1,6-diphosphate, glucose 1,6-diphosphate, myo-inositol 1,4 or 1,3-diphosphate (1)
Gamma-tocopherol|beta-tocopherol (1)
Vanillylmandelate (1)
Sphingomyelin (d18:1/15:0, d16:1/17:0) (1)
1-arachidonoyl-GPC (20:4n6) (1)
Glutarylcarnitine (C5) (1)
Glutarate (pentanedioate) (1)
Sphingomyelin (d18:1/24:1, d18:2/24:0) (1)
Sphingomyelin (d18:1/22:1, d18:2/22:0, d16:1/24:1) (1)
Sphingomyelin (d18:1/20:1, d18:2/20:0) (1)

First Public Date

2019 (1)

Study type

Transcription profiling by array (7)
RNA-seq of non coding RNA (2)
Methylation profiling by high throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2021 (107)
2022 (91)
2025 (89)
2023 (81)
2024 (68)
2020 (61)
2019 (58)
2018 (58)
2016 (52)
2017 (44)
2015 (31)
2012 (22)
2011 (20)
2014 (17)
2010 (14)
2013 (12)
2026 (11)
2009 (6)
2008 (4)
2006 (2)
2007 (2)
2002 (2)
2001 (1)

Lab affiliation

Mass Spectrometry Facility Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ (1)
Center for Translational & Computational Neuroimmunology Department of Neurology 622 West 168th street New York, NY 10032 (1)

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Estimation of non-health gross domestic product (NHGDP) loss due to COVID-19 deaths in West Bengal, India.

Not available

S-EPMC10619121 | biostudies-literature

Model-based estimation of burden of COVID-19 with disability-adjusted life years and value of statistical life in West Bengal, India.

Not available

S-EPMC9871870 | biostudies-literature

Evaluating the design and implementation of the whole systems integrated care programme in North West London: why commissioning proved (again) to be the weakest link.

Not available

S-EPMC6466786 | biostudies-literature

Public involvement in the dissemination of the North West Coast Household Health Survey: Experiences and lessons of co-producing research together.

Not available

S-EPMC6737839 | biostudies-literature

A ketogenic diet rich in fish oil is superior to other fats in preventing NNK-induced lung cancer in A/J mice.

Not available

S-EPMC10920871 | biostudies-literature

Young People's Experiences and Perceptions of YouTuber-Produced Health Content: Implications for Health Promotion.

Not available

S-EPMC7961622 | biostudies-literature

Transcription profiling of Arabidopsis non-homologous end joining mutants

The proposal aims to characterise the pathways of DSB repair and recombination in Arabidopsis with the main focus of this research being the NHEJ pathway of illegitimate recombination. We will build on our expertise and resources in the field of DSB repair in plants, using the Arabidopsis NHEJ mutan...

ORGANISM(S): Arabidopsis thaliana

2008-06-14 | E-GEOD-6178 | biostudies-arrayexpress

What are the social predictors of accident and emergency attendance in disadvantaged neighbourhoods? Results from a cross-sectional household health survey in the north west of England.

Not available

S-EPMC6326270 | biostudies-literature

In Situ Development of Efficient Electroactive Bacterial Community in Urine-Fed Microbial Fuel Cell Cascades

PRJNA560370 | ENA

Comparing proficiency of obstetrics and gynaecology trainees with general surgery trainees using simulated laparoscopic tasks in Health Education England, North-West: a prospective observational study.

Not available

S-EPMC10649792 | biostudies-literature