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TranscriptomicsTranscription profiling of Zebrafish retinal development
Retinal cells are specified in a zebrafish recessive mutant called young (yng) but they fail to terminally differentiate; i.e. extend neurites and make synaptic contacts. A point mutation in a brahma-related gene 1 (brg1) is responsible for this phenotype. In this microarray study, a three-factor fa...
ORGANISM(S): Danio rerio 
2008-10-18 | E-GEOD-8874 | biostudies-arrayexpress
TranscriptomicsMicroRNA profiling of adult male zebrafish exposed to 17-beta estradiol (E2) for 0, 1, 4. 12 and 24 hours
Microarrays displaying zebrafish miRNAs specific probes were hybridized using RNA samples originating from whole body homogenates of male zebrafish exposed to 17-beta estradiol (E2) for 0, 1, 4. 12 and 24 hours. 0 hr fish No. 40, 41, 42. 1hr fish No. 8, 10, 11. 4hr fish No. 19, 20, 23. 12hr fish N...
ORGANISM(S): Danio rerio 
2007-12-30 | E-MEXP-1147 | biostudies-arrayexpress
TranscriptomicsExpression profiling of the retinal pigment epithelium in zebrafish smarca4 mutant
Purpose: The purpose of this study was to develop a framework for analyzing RPE expression profiles from zebrafish eye mutants. Methods: The fish model we used was smarca4 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4), a retinal dystrophic muta...
ORGANISM(S): Danio rerio 
2014-01-03 | E-GEOD-50241 | biostudies-arrayexpress
TranscriptomicsComparative analysis of genes regulated by Dzip1/iguana and Hedgehog in zebrafish
The morphogen Sonic H edgehog governs a wide range of developmental processes. The zebrafish genetic mutant iguana has vascular stability defects due to decreased Shh signaling. Using iguana mutant embryos and embryos treated with the Hedgehog pathway inhibitor cyclopamine, we conducted a microarray...
ORGANISM(S): Danio rerio 
2014-06-30 | E-GEOD-48335 | biostudies-arrayexpress
GenomicsFour Hi-C datasets of whole zebrafish embryos at 24 and 48 hours post fertilization
Four Hi-C datasets of whole zebrafish embryos at 24 and 48 hours post fertilization
PRJEB23964 | ENA
UnknownLbx2 regulates formation of myofibrils.
Not available
S-EPMC2656488 | biostudies-literature
TranscriptomicsTransgenic NUP98-HOXA9 Zebrafish Embryos: Unactivated ('lGl') vs. Cre-activated ('NHA9')
Transcriptional profiling of zebrafish embryos at 28 hours post fertilization, comparing control 'unactivated' Tg(spi1::lox-eGFP-lox::NHA9) embryos with experimental 'Cre-activated' Tg(spi1::NHA9) embryos. Goal was to determine the effects of expressing NUP98-HOXA9 oncogene on global and blood cell-...
ORGANISM(S): Danio rerio 
2014-10-30 | E-GEOD-62793 | biostudies-arrayexpress
TranscriptomicsZebrafish transgenerational methylation profiling in response to TCDD, 5-AZA and MeHg
Adult F0 female zebrafish were fed with control diet or diets containing 5-AZA, MeHg or TCDD. After breeding with unexposed males to produce the F1 generation, livers were sampled from the F0 females. F1 generation embryos were unexposed to test chemicals, were sampled, then bred to produce F2 fish,...
ORGANISM(S): Danio rerio 
2014-03-01 | E-MTAB-2057 | biostudies-arrayexpress
UnknownAutism, Attention, and Alpha Oscillations: An Electrophysiological Study of Attentional Capture.
Not available
S-EPMC5695879 | biostudies-literature
UnknownIdentification of differentially expressed genes in the zebrafish hypothalamic-pituitary axis.
Not available
S-EPMC2804439 | biostudies-literature
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